RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.63	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGKV3-7	A0A075B6H7	116 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGHV3-49	A0A0A0MS15	119 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	CXorf65	A6NEN9	183 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	C17orf112	F2Z3M2	114 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	CST7	O76096	145 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	SIX6	O95475	246 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	MPC2	O95563	127 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	IFNA5	P01569	189 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGHV4-30-4	P0DP06	118 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	ORM2	P19652	201 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	HOXA5	P20719	270 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	TFPI2	P48307	235 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	APOC4	P55056	127 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	PAX9	P55771	341 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	RPL19	P84098	196 aa	Known RBP	5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	PEA15	Q15121	130 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	PYY3	Q5JQD4	70 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	C10orf91	Q5T1B1	145 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	SIGLEC15	Q6ZMC9	328 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	ADAMTSL5	Q6ZMM2	481 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	SSX7	Q7RTT5	188 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	TMEM252	Q8N6L7	170 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	TMEM217	Q8N7C4	229 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR1L4	Q8NGR5	311 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR1B1	Q8NGR6	318 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	SCGB1C1	Q8TD33	95 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	SLC25A32	Q9H2D1	315 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	MRPL36	Q9P0J6	103 aa	Known RBP	5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	HIGD1A	Q9Y241	93 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	CMYA5	Q8N3K9	4069 aa		5.62	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGHV3OR16-13	A0A075B7E8	117 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGHV3-74	A0A0B4J1X5	117 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	IZUMO1R	A6ND01	250 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	FAM24A	A6NFZ4	105 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	PRSS46	E5RG02	174 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	COX7A2P2	O60397	106 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	MT-ND4L	P03901	98 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR5G3	P0C626	314 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	FRMD6-AS1	P0C7T7	363 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	LINC00869	P0C866	280 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	RPL7	P18124	248 aa	Known RBP	5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	FGF7	P21781	194 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZNF90	Q03938	601 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	IL15RA	Q13261	267 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	FCN2	Q15485	313 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	WFDC3	Q8IUB2	231 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	BAP18	Q8IXM2	172 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	MTURN	Q8N3F0	131 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	GBGT1	Q8N5D6	347 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	VPS25	Q9BRG1	176 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	MS4A6A	Q9H2W1	248 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	SRD5A3	Q9H8P0	318 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	NRN1	Q9NPD7	142 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	SMCO4	Q9NRQ5	59 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	TENM3	Q9P273	2699 aa		5.61	□□□□□ -1.51
NR1I3-231	ENST00000512340	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGHV3-66	A0A0C4DH42	116 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	COLCA2	A8K830	154 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	AGPAT2	O15120	278 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	BUB3	O43684	328 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	CD7	P09564	240 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	GIP	P09681	153 aa	Predicted RBP	5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	RPL12	P30050	165 aa	Known RBP	5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	H2BFS	P57053	126 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	PLP1	P60201	277 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	OPCML	Q14982	345 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	TMEM41B	Q5BJD5	291 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	C11orf87	Q6NUJ2	197 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340		Q8N1Y9	231 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	OR5C1	Q8NGR4	320 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	GLMP	Q8WWB7	406 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	SAT2	Q96F10	170 aa	Predicted RBP	5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	SPATA25	Q9BR10	227 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	GGTLC1	Q9BX51	225 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	SLC25A22	Q9H936	323 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	PGPEP1	Q9NXJ5	209 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	WDR83OS	Q9Y284	106 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZFP30	Q9Y2G7	519 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340		U3KQE9	123 aa		5.6	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGKV1D-37	A0A075B6S9	117 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	KIR2DL5B	A0A0G2JN68	375 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	KIR2DL5B	A0A0G2JPC4	375 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	UBE2L5P	A0A1B0GUS4	154 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	C20orf202	A1L168	122 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	IGSF23	A1L1A6	192 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	PMS2P5	A8MQ11	134 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	EREG	O14944	169 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	RPL29	P47914	159 aa	Known RBP	5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	EIF5A	P63241	154 aa	Known RBP	5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	ZNF266	Q14584	549 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	VWC2	Q2TAL6	325 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	C10orf113	Q5VZT2	155 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	SPATA31B1P	Q5VZV4	182 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	FAM90A2P	Q658T7	463 aa		5.59	□□□□□ -1.51
NR1I3-231	ENST00000512340	BPIFA4P	Q86YQ2	179 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms