RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ANGP03950 147 aaKnown RBP4.72□□□□□ -1.65
USP38-203ENST00000511739 PSG3Q16557 428 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 LINC01559Q495D7 138 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 VOPP1Q96AW1 172 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 A0A096LPF7 62 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 A0A1B0GV90 55 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 PRSS29PA6NIE9 313 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 C2orf82Q6UX34 121 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 Q6ZS92 163 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 TMEM190Q8WZ59 177 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 MGST2Q99735 147 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 RALGAPA1Q6GYQ0 2036 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 DENND4CQ5VZ89 1909 aa4.72□□□□□ -1.65
USP38-203ENST00000511739 TRAV5A0A0B4J249 113 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 IGHV1-69DA0A0B4J2H0 117 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 FAM90A9PA6NNJ1 464 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 IGHV1-69P01742 117 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 IFITM2Q01629 132 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 ANAPC13Q9BS18 74 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 MEGF9Q9H1U4 602 aa4.71□□□□□ -1.65
USP38-203ENST00000511739 NXPH4O95158 308 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 CCL18P55774 89 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 GAGE6Q13070 117 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 SLAQ13239 276 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 EFNB3Q15768 340 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 SPINK13Q1W4C9 94 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 SLC25A48Q6ZT89 311 aaKnown RBP4.71□□□□□ -1.66
USP38-203ENST00000511739 TRPT1Q86TN4 253 aaKnown RBP4.71□□□□□ -1.66
USP38-203ENST00000511739 DKK1O94907 266 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 CD55P08174 381 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 CRYGSP22914 178 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 PRTN3P24158 256 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 Q8TAT8 98 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 FNDC4Q9H6D8 234 aaPredicted RBP4.71□□□□□ -1.66
USP38-203ENST00000511739 hADV29S1A0JD25 119 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 SHISA3A0PJX4 238 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 IGKV1-5P01602 117 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 INAFM2P0DMQ5 153 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 TCTEX1D4Q5JR98 221 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 LYZL1Q6UWQ5 148 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 TSKUQ8WUA8 353 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 REG4Q9BYZ8 158 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 OCIAD2Q56VL3 154 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 IGFL4Q6B9Z1 124 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 TRGV9Q99603 122 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 PLXNB3Q9ULL4 1909 aa4.71□□□□□ -1.66
USP38-203ENST00000511739 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 IGKV1D-13A0A0B4J2D9 117 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 CLPSL1A2RUU4 121 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 EFNA2O43921 213 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 IGKV1-13P0DP09 117 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 UBE2E1P51965 193 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 KLK5Q9Y337 293 aaPredicted RBP4.7□□□□□ -1.66
USP38-203ENST00000511739 ZNF106Q9H2Y7 1883 aaKnown RBP4.7□□□□□ -1.66
USP38-203ENST00000511739 D6R8Y8 96 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 SH2D1AO60880 128 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 IGHG3P01860 377 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 H2BFSP57053 126 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 MYO7BQ6PIF6 2116 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 CHCHD1Q96BP2 118 aaKnown RBP4.7□□□□□ -1.66
USP38-203ENST00000511739 SCRT2Q9NQ03 307 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 SIGLEC9Q9Y336 463 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 SERF1AO75920 110 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 SRP19P09132 144 aaKnown RBP4.7□□□□□ -1.66
USP38-203ENST00000511739 IGFBP3P17936 291 aaPredicted RBP4.7□□□□□ -1.66
USP38-203ENST00000511739 DOCK8Q8NF50 2099 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 E7EQL1 145 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 SOCS3O14543 225 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 ZNRF2Q8NHG8 242 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 CACNA1DQ01668 2161 aa4.7□□□□□ -1.66
USP38-203ENST00000511739 UTRNP46939 3433 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 GAGE2BQ13066 116 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 DMRTC2Q8IXT2 367 aaPredicted RBP4.69□□□□□ -1.66
USP38-203ENST00000511739 ZNF503Q96F45 646 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 C1orf43Q9BWL3 253 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 GSN-AS1Q9NRJ2 163 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 NOTCH3Q9UM47 2321 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 H0YJW9 148 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 IGLV2-23P01705 113 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 PRR30Q53SZ7 412 aaPredicted RBP4.69□□□□□ -1.66
USP38-203ENST00000511739 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 TRAV8-1A0A0A6YYK1 113 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 A0A0J9YY99 117 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 A0A1B0GTI1 187 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 C9orf66Q5T8R8 295 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 LYPD2Q6UXB3 125 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 RTBDNQ9BSG5 229 aaPredicted RBP4.69□□□□□ -1.66
USP38-203ENST00000511739 TSSC4Q9Y5U2 329 aaPredicted RBP4.69□□□□□ -1.66
USP38-203ENST00000511739 PI4KAP42356 2102 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 KIF26BQ2KJY2 2108 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 DOCK7Q96N67 2140 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 TICRRQ7Z2Z1 1910 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 ATP6V0E1O15342 81 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 ADMP35318 185 aa4.69□□□□□ -1.66
USP38-203ENST00000511739 NDUFAF3Q9BU61 184 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms