RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 GTSCR1Q86UQ5 136 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 GPHB5Q86YW7 130 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 SELENOHQ8IZQ5 122 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 Q8N402 240 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM229BQ8NBD8 167 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 OR51S1Q8NGJ8 323 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 OR52E5Q8NH55 327 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 OR4A5Q8NH83 315 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TERB2Q8NHR7 220 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 DYNC2LI1Q8TCX1 351 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 MCUBQ9NWR8 336 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 C21orf62Q9NYP8 219 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 MTFP1Q9UDX5 166 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 PAIP2BQ9ULR5 123 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 SORL1Q92673 2214 aa3.4□□□□□ -1.87
PTPN13-208ENST00000511105 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.87
PTPN13-208ENST00000511105 TRBV7-1A0A0A6YYK4 115 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 A0A1B0GU03 582 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 FABP12A6NFH5 140 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 DISC1C4P0D8 188 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 GABARAPH6UMI1 98 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 I3L2K1 104 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 DEFB4AO15263 64 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 RBFOX2O43251 390 aaKnown RBP eCLIP3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CREBL2O60519 120 aaPredicted RBP3.39□□□□□ -1.87
PTPN13-208ENST00000511105 DHFRP00374 187 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CTSGP08311 255 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 RPL5P46777 297 aaKnown RBP3.39□□□□□ -1.87
PTPN13-208ENST00000511105 AKR1C2P52895 323 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 TAS2R19P59542 299 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CXCL6P80162 114 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CASC10Q5T4H9 136 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LCN12Q6JVE5 192 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LPCAT3Q6P1A2 487 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LHFPL1Q86WI0 220 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 GDPD1Q8N9F7 314 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 OR4C16Q8NGL9 310 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 MCFD2Q8NI22 146 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CD300LFQ8TDQ1 290 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 AP3S1Q92572 193 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LSM10Q969L4 123 aaKnown RBP3.39□□□□□ -1.87
PTPN13-208ENST00000511105 ISOC1Q96CN7 298 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 PGLYRP4Q96LB8 373 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 LINC00479Q96M42 142 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM56Q96MV1 263 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 RHPN1-AS1Q9BWJ2 59 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 PRNDQ9UKY0 176 aa3.39□□□□□ -1.87
PTPN13-208ENST00000511105 C14orf166Q9Y224 244 aaKnown RBP3.39□□□□□ -1.87
PTPN13-208ENST00000511105 CEBPZOSA8MTT3 80 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 LGALS9O00182 355 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 MRPS12O15235 138 aaKnown RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 NUPL2O15504 423 aaKnown RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 GNG7O60262 68 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 CD74P04233 296 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 AKAIN1P0CW23 69 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 RNASE2P10153 161 aaKnown RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 IAPPP10997 89 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 S100GP29377 79 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 SNCAP37840 140 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 CCR6P51684 374 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 DEFB1P60022 68 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 ERHP84090 104 aaKnown RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 PRCDQ00LT1 54 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 MSMO1Q15800 293 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 TOMM20LQ6UXN7 152 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 LINC00322Q6ZN03 302 aaPredicted RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 TMED4Q7Z7H5 227 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 ZNF546Q86UE3 836 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 SLC35G3Q8N808 338 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 CCDC71LQ8N9Z2 235 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 MUC7Q8TAX7 377 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 ZFAND1Q8TCF1 268 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM230Q96A57 120 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 TM2D3Q9BRN9 247 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 C20orf85Q9H1P6 137 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 ENY2Q9NPA8 101 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM14BQ9NUH8 114 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 FKBP11Q9NYL4 201 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 COMMD9Q9P000 198 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 MRPL27Q9P0M9 148 aaKnown RBP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 FLVCR2Q9UPI3 526 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 UFC1Q9Y3C8 167 aa3.38□□□□□ -1.87
PTPN13-208ENST00000511105 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
PTPN13-208ENST00000511105 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
PTPN13-208ENST00000511105 DNAH7Q8WXX0 4024 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 TRAV14DV4A0A0A6YYC5 116 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 ANKRD20A5PA0PJZ0 165 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 KNCNA6PVL3 124 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 H7C423 109 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 DNASE2O00115 360 aaPredicted RBP3.37□□□□□ -1.87
PTPN13-208ENST00000511105 SIVA1O15304 175 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 C8orf88P0DMB2 117 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 OPRK1P41145 380 aa3.37□□□□□ -1.87
PTPN13-208ENST00000511105 TMBIM6P55061 237 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms