RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 TRAV9-2A0A087WT02 112 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 H3BNG1 76 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 J3KRW8 73 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 RGS5O15539 181 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 HYPMO75409 117 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 ATP6V1G2O95670 118 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 SSBP1Q04837 148 aaKnown RBP7.13□□□□□ -1.27
MBD4-208ENST00000509828 ICAM4Q14773 271 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 OR51S1Q8NGJ8 323 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 RNASE8Q8TDE3 154 aaKnown RBP7.13□□□□□ -1.27
MBD4-208ENST00000509828 CIB3Q96Q77 187 aaPredicted RBP7.13□□□□□ -1.27
MBD4-208ENST00000509828 FUNDC2Q9BWH2 189 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 SCP2D1Q9UJQ7 156 aa7.13□□□□□ -1.27
MBD4-208ENST00000509828 IGKV1OR2-108A0A075B7D4 117 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 WRBO00258 174 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 CXCL3P19876 107 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 MRPS10P82664 201 aaKnown RBP7.12□□□□□ -1.27
MBD4-208ENST00000509828 TMED4Q7Z7H5 227 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 C17orf77Q96MU5 243 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 SHANK2-AS3Q9BTD1 123 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 TMPRSS5Q9H3S3 457 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 MCUBQ9NWR8 336 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 RNF24Q9Y225 148 aa7.12□□□□□ -1.27
MBD4-208ENST00000509828 NXPH4O95158 308 aa7.11□□□□□ -1.27
MBD4-208ENST00000509828 GCSHP23434 173 aa7.11□□□□□ -1.27
MBD4-208ENST00000509828 KRTAP10-1P60331 282 aa7.11□□□□□ -1.27
MBD4-208ENST00000509828 SPANXN5Q5MJ07 72 aa7.11□□□□□ -1.27
MBD4-208ENST00000509828 TMEM182Q6ZP80 229 aaPredicted RBP7.11□□□□□ -1.27
MBD4-208ENST00000509828 Q6ZSN1 163 aa7.11□□□□□ -1.27
MBD4-208ENST00000509828 A0A096LPF7 62 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 H3BRN7 92 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 PAX4O43316 350 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 IL18Q14116 193 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 Q6ZRN7 208 aaPredicted RBP7.1□□□□□ -1.27
MBD4-208ENST00000509828 CYP2G1PQ6ZSU1 146 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 Q6ZTI0 123 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 PARD6GQ9BYG4 376 aaPredicted RBP7.1□□□□□ -1.27
MBD4-208ENST00000509828 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
MBD4-208ENST00000509828 TNFRSF18Q9Y5U5 241 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 ICOSQ9Y6W8 199 aa7.1□□□□□ -1.27
MBD4-208ENST00000509828 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
MBD4-208ENST00000509828 A0A087WTM6 91 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 TRGV1A0A0A0MS02 117 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 SYNGR2O43760 224 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
MBD4-208ENST00000509828 LINC00869P0C866 280 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 VAMP1P23763 118 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 LEPP41159 167 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 GFI1BQ5VTD9 330 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 ACOT7LQ6ZUV0 252 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 LINC00612Q8N6U2 182 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 ZBTB8BQ8NAP8 495 aaPredicted RBP7.09□□□□□ -1.27
MBD4-208ENST00000509828 ARL6Q9H0F7 186 aa7.09□□□□□ -1.27
MBD4-208ENST00000509828 A0A087X0K7 114 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 DUXBA0A1W2PPF3 345 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 PMS2P5A8MQ11 134 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 H3BP45 60 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 EVI2AP22794 236 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 SELENOTP62341 195 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 HAMPP81172 84 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 LCN15Q6UWW0 184 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 SMIM4Q8WVI0 70 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 DIRAS2Q96HU8 199 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 VSIG2Q96IQ7 327 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 SLC50A1Q9BRV3 221 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 FUT9Q9Y231 359 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 LY96Q9Y6Y9 160 aa7.08□□□□□ -1.28
MBD4-208ENST00000509828 IGLV5-52A0A0A0MRZ9 124 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 PSCAO43653 123 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 PITX3O75364 302 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 DAZ2Q13117 558 aaKnown RBP7.07□□□□□ -1.28
MBD4-208ENST00000509828 ZNF680Q8NEM1 530 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 PYGO2Q9BRQ0 406 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 GSN-AS1Q9NRJ2 163 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 MSRB1Q9NZV6 116 aa7.07□□□□□ -1.28
MBD4-208ENST00000509828 H3BTX0 84 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 CTDSP2O14595 271 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 GOSR2O14653 212 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 IGHV3-53P01767 116 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 HOXB5P09067 269 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 SLC25A6P12236 298 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 CXCL2P19875 107 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 RRAS2P62070 204 aaPredicted RBP7.06□□□□□ -1.28
MBD4-208ENST00000509828 MRPL23Q16540 153 aaKnown RBP7.06□□□□□ -1.28
MBD4-208ENST00000509828 BPIFA4PQ86YQ2 179 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 ARV1Q9H2C2 271 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 ZNF331Q9NQX6 463 aaPredicted RBP7.06□□□□□ -1.28
MBD4-208ENST00000509828 PSENENQ9NZ42 101 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 RABL2AQ9UBK7 228 aaPredicted RBP7.06□□□□□ -1.28
MBD4-208ENST00000509828 MGAT4CQ9UBM8 478 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 RABL2BQ9UNT1 228 aa7.06□□□□□ -1.28
MBD4-208ENST00000509828 FLG2Q5D862 2391 aaPredicted RBP7.05□□□□□ -1.28
MBD4-208ENST00000509828 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
MBD4-208ENST00000509828 PRAC2D3DTV9 90 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms