RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TMEM70Q9BUB7 260 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 LINC00614P0C842 121 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 FBLN7Q53RD9 439 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 MINOS1Q5TGZ0 78 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 MINOS1-NBL1R4GNA1 71 aa14.09□□□□□ -0.15
CCHCR1-228ENST00000509552 TACC2O95359 2948 aa14.08□□□□□ -0.15
CCHCR1-228ENST00000509552 LRBAP50851 2863 aa14.08□□□□□ -0.15
CCHCR1-228ENST00000509552 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 C20orf202A1L168 122 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 SH2D7A6NKC9 451 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 CT45A10P0DMU9 189 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 ZNF25P17030 456 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 CSN1S1P47710 185 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 Q71RC1 249 aaPredicted RBP14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 M0QZ24 198 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 CLEC5AQ9NY25 188 aa14.08□□□□□ -0.16
CCHCR1-228ENST00000509552 IGHV1-24A0A0C4DH33 117 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 A0A1B0GW15 77 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 SERTM2A0A1B0GWG4 89 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 ZNF785A8K8V0 405 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 M0R3E3 92 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 NDPQ00604 133 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 PSG9Q00887 426 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 COL5A1-AS1Q5SY13 56 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 Q6AWC8 147 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 TMEM11P17152 192 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 CYB5R2Q6BCY4 276 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 DYNAPQ8N1N2 210 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 Q8N6K4 173 aa14.07□□□□□ -0.16
CCHCR1-228ENST00000509552 LEPROTL1O95214 131 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 ARMS2P0C7Q2 107 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 EBI3Q14213 229 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 MAJINQ3KP22 176 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 DMRTA1Q5VZB9 504 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 DTX2Q86UW9 622 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 BCL6BQ8N143 479 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 ASCL2Q99929 193 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 F8W735 103 aaPredicted RBP14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 NDUFB8O95169 186 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 RPL7P18124 248 aaKnown RBP14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 FAM120AOSQ5T036 256 aa14.06□□□□□ -0.16
CCHCR1-228ENST00000509552 OR5AL1P0C617 328 aa14.05□□□□□ -0.16
CCHCR1-228ENST00000509552 CRIP1P50238 77 aa14.05□□□□□ -0.16
CCHCR1-228ENST00000509552 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
CCHCR1-228ENST00000509552 IGHV3-23P01764 117 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 ZFP36P26651 326 aaKnown RBP14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 OR2T8A6NH00 312 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 OVOL3O00110 214 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 CRXO43186 299 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 PRB4P10163 310 aaPredicted RBP14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 S100A7P31151 101 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 TPPP3Q9BW30 176 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 C1RLQ9NZP8 487 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 LAMTOR2Q9Y2Q5 125 aa14.04□□□□□ -0.16
CCHCR1-228ENST00000509552 GATD1Q8NB37 220 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 C8orf49Q96NF6 230 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 DCHS2Q6V1P9 2916 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 SYS1-DBNDD2H3BUS1 97 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 FAM106CPP0CH98 169 aa14.03□□□□□ -0.16
CCHCR1-228ENST00000509552 OR4C46A6NHA9 309 aa14.02□□□□□ -0.16
CCHCR1-228ENST00000509552 TSPOP30536 169 aa14.02□□□□□ -0.16
CCHCR1-228ENST00000509552 ARL6IP6Q8N6S5 226 aa14.02□□□□□ -0.16
CCHCR1-228ENST00000509552 TMEM208Q9BTX3 173 aa14.02□□□□□ -0.16
CCHCR1-228ENST00000509552 IGHV7-81A0A0B4J1V7 117 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 TMEM189A5PLL7 270 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 CTSGP08311 255 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 IGLL1P15814 213 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 SAPCD1Q5SSQ6 148 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 SPATA12Q7Z6I5 190 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 SIRPDQ9H106 197 aa14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 MRPS16Q9Y3D3 137 aaKnown RBP14.02□□□□□ -0.17
CCHCR1-228ENST00000509552 FBLL1A6NHQ2 334 aaKnown RBP14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 CSN3P07498 182 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 ZNF138P52744 262 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 ZNF124Q15973 351 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 MAP1LC3CQ9BXW4 147 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 DLEU1O43261 78 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 EGR2P11161 476 aaPredicted RBP14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 HSPB8Q9UJY1 196 aa14.01□□□□□ -0.17
CCHCR1-228ENST00000509552 NBASA2RRP1 2371 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 IGF2RP11717 2491 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 GAGE1Q13065 139 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 Q8N9W7 124 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 TMUB1Q9BVT8 246 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 TMEM191AQ9H0A3 160 aa14□□□□□ -0.17
CCHCR1-228ENST00000509552 RELQ04864 619 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 RELNP78509 3460 aa13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 IGKV2-40A0A087WW87 121 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 SH2D1AO60880 128 aa13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 IGKV2D-40P01614 121 aaPredicted RBP13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 TFPI2P48307 235 aa13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 UBE2E1P51965 193 aa13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 ZNF493Q6ZR52 646 aa13.99□□□□□ -0.17
CCHCR1-228ENST00000509552 IGHV2-70DA0A0C4DH43 119 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 NDUFS7O75251 213 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 LYZL1Q6UWQ5 148 aa13.98□□□□□ -0.17
CCHCR1-228ENST00000509552 PET117Q6UWS5 81 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms