RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 MYO9AB2RTY4 2548 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 S100A9P06702 114 aaKnown RBP11.54□□□□□ -0.56
PHF3-209ENST00000509330 GZMBP10144 247 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 PF4V1P10720 104 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 TCF24Q7RTU0 167 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 A0A096LNT2 108 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 ZNF705FA8MVS1 300 aaPredicted RBP11.54□□□□□ -0.56
PHF3-209ENST00000509330 TGOLN2O43493 480 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 DSCR9P59020 149 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 ATP5G2Q06055 141 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 EEF1AKMT3Q96AZ1 226 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 Q96MF0 132 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
PHF3-209ENST00000509330 ACANP16112 2415 aa11.54□□□□□ -0.56
PHF3-209ENST00000509330 IGKV2-40A0A087WW87 121 aaPredicted RBP11.53□□□□□ -0.56
PHF3-209ENST00000509330 IGKV2D-40P01614 121 aaPredicted RBP11.53□□□□□ -0.56
PHF3-209ENST00000509330 VN1R17PQ8TDU5 208 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 GAR1Q9NY12 217 aaKnown RBP11.53□□□□□ -0.56
PHF3-209ENST00000509330 TRAV20A0A0B4J274 112 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 A6NDX4 124 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 BMPR1BO00238 502 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 Q86TA4 180 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
PHF3-209ENST00000509330 FLNAP21333 2647 aaKnown RBP11.53□□□□□ -0.56
PHF3-209ENST00000509330 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.56
PHF3-209ENST00000509330 C10orf99Q6UWK7 81 aa11.52□□□□□ -0.56
PHF3-209ENST00000509330 RNF182Q8N6D2 247 aa11.52□□□□□ -0.56
PHF3-209ENST00000509330 FMC1Q96HJ9 113 aa11.52□□□□□ -0.56
PHF3-209ENST00000509330 ZNF48Q96MX3 618 aaPredicted RBP11.52□□□□□ -0.56
PHF3-209ENST00000509330 NIT2Q9NQR4 276 aa11.52□□□□□ -0.56
PHF3-209ENST00000509330 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.56
PHF3-209ENST00000509330 ITPR2Q14571 2701 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 CAMPP49913 170 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 DEFB113Q30KQ7 82 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 IL17RELQ6ZVW7 336 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 CUBNO60494 3623 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 LTAP01374 205 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 Q8TAT8 98 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 NEU1Q99519 415 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 AAMDCQ9H7C9 122 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
PHF3-209ENST00000509330 ZNF785A8K8V0 405 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 KLF12Q9Y4X4 402 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 F2Z2F3 143 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 DAZAP1Q96EP5 407 aaKnown RBP11.51□□□□□ -0.57
PHF3-209ENST00000509330 C8orf49Q96NF6 230 aa11.51□□□□□ -0.57
PHF3-209ENST00000509330 SSBP4Q9BWG4 385 aaPredicted RBP11.51□□□□□ -0.57
PHF3-209ENST00000509330 SMAD7O15105 426 aaKnown RBP11.5□□□□□ -0.57
PHF3-209ENST00000509330 NUPR1O60356 82 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 P01737 135 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 S100A8P05109 93 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
PHF3-209ENST00000509330 NUP35Q8NFH5 326 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 HIST1H2BLQ99880 126 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 NOTCH2Q04721 2471 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 PYY3Q5JQD4 70 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 TXN2Q99757 166 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 MLST8Q9BVC4 326 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
PHF3-209ENST00000509330 TMSB15BA0A087X1C1 80 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 SMIM27A0A1W2PRY6 76 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 CLPSL1A2RUU4 121 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 ARL3P36405 182 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 TMEM183AQ8IXX5 376 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 PACRGQ96M98 296 aaPredicted RBP11.49□□□□□ -0.57
PHF3-209ENST00000509330 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
PHF3-209ENST00000509330 HECTD1Q9ULT8 2610 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 PGLYRP4Q96LB8 373 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 IGHG2P01859 326 aa11.49□□□□□ -0.57
PHF3-209ENST00000509330 BEX4Q9NWD9 120 aaPredicted RBP11.49□□□□□ -0.57
PHF3-209ENST00000509330 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 TCEAL7Q9BRU2 100 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 TRBV7-1A0A0A6YYK4 115 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 BUB3O43684 328 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 S100A7AQ86SG5 101 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 OR2D3Q8NGH3 330 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
PHF3-209ENST00000509330 CR1P17927 2039 aa11.48□□□□□ -0.57
PHF3-209ENST00000509330 CHEK1O14757 476 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 AMBPP02760 352 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
PHF3-209ENST00000509330 ERCC8Q13216 396 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 PSG3Q16557 428 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 OR5R1Q8NH85 324 aa11.47□□□□□ -0.57
PHF3-209ENST00000509330 VGLL1Q99990 258 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms