RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 IGHV1-24A0A0C4DH33 117 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 A0A0D9SG52 128 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 A0A1W2PS18 150 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 PMS2P5A8MQ11 134 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 H0Y9J4 135 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 TIMM17BO60830 172 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 RAMP1O60894 148 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 CBLN1P23435 193 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 HMGN3Q15651 99 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 OR2T2Q6IF00 324 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 MIR17HGQ75NE6 70 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 VSIG2Q96IQ7 327 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 PHF3Q92576 2039 aaKnown RBP3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGLV4-3A0A075B6K6 122 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGKV1D-13A0A0B4J2D9 117 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 PRAC2D3DTV9 90 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGKV1-13P0DP09 117 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGF2BP2-AS1Q96M15 143 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 RNF122Q9H9V4 155 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 COA4Q9NYJ1 87 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV3-20A0A0C4DH32 117 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 PSPHP1O15172 72 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 H1FXQ92522 213 aaKnown RBP3.07□□□□□ -1.92
NEDD4-209ENST00000508871 DOCK7Q96N67 2140 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 KANTRA0A1W2PQU2 76 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF138P52744 262 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 B3GALT5-AS1P59052 145 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 LINC01545Q5VT33 79 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 FAM19A3Q7Z5A8 133 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 DEFB126Q9BYW3 111 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 METTL1Q9UBP6 276 aaKnown RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 UQCR10Q9UDW1 63 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 CHCHD2Q9Y6H1 151 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 A0A0J9YXV3 536 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 SLC25A6P12236 298 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 RIGQ13278 110 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 TEN1Q86WV5 123 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM106BQ9NUM4 274 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 PCSK5Q92824 1860 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 ATG2BQ96BY7 2078 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 MYO10Q9HD67 2058 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV3-49A0A0A0MS15 119 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 TCL1BO95988 128 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 INSP01308 110 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 AMBPP02760 352 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 RPS28P62857 69 aaKnown RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 RPL18Q07020 188 aaKnown RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 ORMDL3Q8N138 153 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 FAM57AQ8TBR7 257 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 SLC35B3Q9H1N7 401 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 SDF2L1Q9HCN8 221 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 ABRACLQ9P1F3 81 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 A0A0G2JRQ6 117 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 MSGN1A6NI15 193 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 G3V3Q6 166 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 TCRAP04437 139 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 SHISA6Q6ZSJ9 500 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 BBC3Q96PG8 261 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 DHRS4-AS1Q9P1J3 65 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 IER3IP1Q9Y5U9 82 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 IGLV5-52A0A0A0MRZ9 124 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 H3BT86 120 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 CSRP1P21291 193 aaKnown RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 ERHP84090 104 aaKnown RBP3.06□□□□□ -1.92
NEDD4-209ENST00000508871 CAMK2N1Q7Z7J9 78 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 RBM12B-AS1Q9P1G2 102 aa3.06□□□□□ -1.92
NEDD4-209ENST00000508871 MUC1P15941 1255 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 SSBP1Q04837 148 aaKnown RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 FHL2Q14192 279 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 C10orf128Q5T292 105 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 SLC35E3Q7Z769 313 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 NUMA1Q14980 2115 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 PABPC1L2AQ5JQF8 200 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 LINC01590Q5TEZ4 76 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 LCNL1Q6ZST4 164 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 LCA10Q71F78 164 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 C18orf12Q96KH6 178 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 ICOSQ9Y6W8 199 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 IGLV1-36A0A0B4J1U3 117 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV3-74A0A0B4J1X5 117 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 SRRM4A7MD48 611 aaKnown RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 HYPMO75409 117 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 DUSP14O95147 198 aaKnown RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 IGLC6P0CF74 106 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 FOXI1Q12951 378 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 SFTA2Q6UW10 78 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 PRNTQ86SH4 94 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 AMN1Q8IY45 258 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 TUBA4BQ9H853 241 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 KRTAP16-1A8MUX0 517 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 KBTBD11O94819 623 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF20P17024 532 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 LOXL1Q08397 574 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 KRTAP27-1Q3LI81 207 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 SOSTDC1Q6X4U4 206 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 C14orf178Q8N769 122 aaPredicted RBP3.05□□□□□ -1.92
NEDD4-209ENST00000508871 DEFB127Q9H1M4 99 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms