RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 FBLN7Q53RD9 439 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 TMEM75Q8N9X5 138 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 SGK494Q96LW2 274 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 FAM103A1Q9BTL3 118 aaKnown RBP9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 VAMP8Q9BV40 100 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 POLQO75417 2590 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 NBPF19A0A087WUL8 3843 aa9.08□□□□□ -0.96
PRPF40B-203ENST00000508736 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 WI2-2373I1.2A0A1W2PRP0 233 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 A0A1W2PS18 150 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 NCBP2LA6PVI3 153 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 S100A7P31151 101 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 RBPMS2Q6ZRY4 209 aaKnown RBP9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 GOLT1AQ6ZVE7 132 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 ZNF491Q8N8L2 437 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 Q8N9W7 124 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 C18orf32Q8TCD1 76 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 RCHY1Q96PM5 261 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
PRPF40B-203ENST00000508736 IGHV4-30-2A0A087WSY4 118 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 IGLC2P0DOY2 106 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 CAMPP49913 170 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 KRTDAPP60985 99 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 PDE6HQ13956 83 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 ASPHD1Q5U4P2 390 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 PRNTQ86SH4 94 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 EXOC3-AS1Q8N2X6 119 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 PIP4P2Q8N4L2 257 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 C20orf144Q9BQM9 153 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 BAHCC1Q9P281 2608 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 VPS13CQ709C8 3753 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 MED13LQ71F56 2210 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 NPIPB6E9PJ23 425 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 SLC25A16P16260 332 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 Q56UQ5 140 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 LINC00469Q8N7U9 141 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 FBXL7Q9UJT9 491 aa9.06□□□□□ -0.96
PRPF40B-203ENST00000508736 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 ASH1LQ9NR48 2969 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 ABCA1O95477 2261 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 WNK2Q9Y3S1 2297 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 IGHV7-81A0A0B4J1V7 117 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 IGHV1-69DA0A0B4J2H0 117 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 SERTM2A0A1B0GWG4 89 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 HSBP1O75506 76 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 IGHV1-69P01742 117 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 FCGR2BP31994 310 aaPredicted RBP9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 GDF5OSQ5U4N7 250 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 SIGLEC15Q6ZMC9 328 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 FANCD2OSQ96PS1 177 aa9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
PRPF40B-203ENST00000508736 IGLV2-11P01706 119 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 CD33P20138 364 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 GATA3P23771 443 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 NDPQ00604 133 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 KLF17Q5JT82 389 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 FAM120AOSQ5T036 256 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 LINC00322Q6ZN03 302 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 MEGF9Q9H1U4 602 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 CHEK1O14757 476 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 MSMBP08118 114 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 EGR2P11161 476 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 NTF3P20783 257 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 CSN1S1P47710 185 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 PSG9Q00887 426 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 TXN2Q99757 166 aa9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 FLNBO75369 2602 aaKnown RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
PRPF40B-203ENST00000508736 B4DSR2 109 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 M0R143 59 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 MRPS12O15235 138 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 RPL7P18124 248 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 RAB4AP20338 218 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 PSG3Q16557 428 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 DEFB113Q30KQ7 82 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 CIARTQ8N365 385 aaPredicted RBP9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
PRPF40B-203ENST00000508736 MIEN1Q9BRT3 115 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms