RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TRACP01848 142 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 COX7A1P24310 79 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 S100A3P33764 101 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 CEMP1Q6PRD7 247 aaPredicted RBP5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 ZNF101Q8IZC7 436 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 ATG2BQ96BY7 2078 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 MICAL3Q7RTP6 2002 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 LAMA2P24043 3122 aaKnown RBP5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 LINC01548A6NM66 108 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 H3BT86 120 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 K7ERJ3 54 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 NDUFB2O95178 105 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 EBI3Q14213 229 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 OR2T2Q6IF00 324 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 BPIFA4PQ86YQ2 179 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 OR10G2Q8NGC3 310 aa5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 LSM10Q969L4 123 aaKnown RBP5.52□□□□□ -1.53
PDGFRA-206ENST00000508170 IGKV1-12A0A0C4DH73 117 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 C9JCJ5 164 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 PEX7O00628 323 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 NTN3O00634 580 aaPredicted RBP5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 IGKV1D-12P01611 117 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 BGLAPP02818 100 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 ELK1P19419 428 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 TWIST1Q15672 202 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 WFDC5Q8TCV5 224 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 LSM2Q9Y333 95 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 UBL3O95164 117 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 FHL1Q13642 323 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 PDPNQ86YL7 162 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 FAM104AQ969W3 186 aa5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 TXNL4BQ9NX01 149 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-206ENST00000508170 NDUFB6O95139 128 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 CGAP01215 116 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 TRGC1P0CF51 173 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 UBE2BP63146 152 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 VSIG2Q96IQ7 327 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 AQP10Q96PS8 301 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 NDUFB11Q9NX14 153 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 EPDR1Q9UM22 224 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 IGKV1-9A0A0C4DH69 117 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 LOC107986453A0A1B0GWG9 222 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 M0R233 179 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 CPSF4O95639 269 aaKnown RBP5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 CYB5AP00167 134 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 PRM2P04554 102 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 SLC25A6P12236 298 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 TPT1P13693 172 aaKnown RBP5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 CAV3P56539 151 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 ZNF497Q6ZNH5 498 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 MPLKIPQ8TAP9 179 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 RAB37Q96AX2 223 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 SMIM14Q96QK8 99 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 IL36BQ9NZH7 164 aa5.5□□□□□ -1.53
PDGFRA-206ENST00000508170 IGHV3-16A0A0C4DH30 117 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 MCRIP1C9JLW8 97 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 CFDP00746 253 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 PIPP12273 146 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 HERVK_113P61574 105 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 CCL20P78556 96 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 BSPH1Q075Z2 132 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 RSPO1Q2MKA7 263 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 LGALSLQ3ZCW2 172 aaPredicted RBP5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 LINC01545Q5VT33 79 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 TMEM183AQ8IXX5 376 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 MORN4Q8NDC4 146 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 NUP37Q8NFH4 326 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 PRELID3AQ96N28 172 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 DPM3Q9P2X0 92 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 TAC3Q9UHF0 121 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 SERP1Q9Y6X1 66 aa5.49□□□□□ -1.53
PDGFRA-206ENST00000508170 CHD3Q12873 2000 aaKnown RBP5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 FANCMQ8IYD8 2048 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 SCN2AQ99250 2005 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 A0A087WW49 117 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 C16orf97H3BN30 126 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 S100A4P26447 101 aaKnown RBP5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 DYNLT3P51808 116 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 YPEL3P61236 119 aaPredicted RBP5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 PRR4Q16378 134 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 C3orf56Q8N813 242 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 ZNF286AQ9HBT8 521 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 PIKFYVEQ9Y2I7 2098 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 GRIFINA4D1Z8 144 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 F8W1H4 67 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 CYCSP99999 105 aaKnown RBP5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 MAL2Q969L2 176 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 BCL2L10Q9HD36 194 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 LINC00588Q9Y4M8 146 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
PDGFRA-206ENST00000508170 IGHV4-30-2A0A087WSY4 118 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 SFT2D2O95562 160 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 CSN1S1P47710 185 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 TAS2R45P59539 299 aa5.47□□□□□ -1.53
PDGFRA-206ENST00000508170 FGF12P61328 243 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms