RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CCDC94Q9BW85 323 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 CACYBPQ9HB71 228 aaKnown RBP0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 LYRM2Q9NU23 88 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 SSR3Q9UNL2 185 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 CAMSAP2Q08AD1 1489 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 ADGRL3Q9HAR2 1447 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 MED12Q93074 2177 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 RFX7Q2KHR2 1363 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 PHRF1Q9P1Y6 1649 aaKnown RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 TRAV23DV6A0A075B6W5 121 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 TRBV30A0A0K0K1B3 111 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 RIIAD1A6NNX1 92 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 HIST1H2BKO60814 126 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 C1QBP02746 253 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 TRGC2P03986 189 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 CRHP06850 196 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 HIST1H2BJP06899 126 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 OGNP20774 298 aaKnown RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 PHBP35232 272 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 FOXA3P55318 350 aaPredicted RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 ARF6P62330 175 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 CIRBPQ14011 172 aaKnown RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 PATE2Q6UY27 113 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 LINC00299Q6ZSB3 139 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 CROCCP2Q86T23 111 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 ATOH7Q8N100 152 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 PXT1Q8NFP0 134 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 Q8TAT8 98 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 NEK7Q8TDX7 302 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 DGCR14Q96DF8 476 aaKnown RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZC2HC1AQ96GY0 325 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 JPT1Q9UK76 154 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 BOKQ9UMX3 212 aaPredicted RBP0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 CEP164Q9UPV0 1460 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 CAMSAP1Q5T5Y3 1602 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 NAV2Q8IVL1 2488 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 NUP98P52948 1817 aa0.2□□□□□ -2.38
HMGB1P29-201ENST00000505659 APCP25054 2843 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 MUC5ACP98088 5654 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 ASH1LQ9NR48 2969 aaKnown RBP0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 NISCHQ9Y2I1 1504 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZGRF1Q86YA3 2104 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 B4DSR2 109 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 K7EIL1 84 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 GPR31O00270 319 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 RER1O15258 196 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 ATP5HO75947 161 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 IGLV1-51P01701 117 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 KDELR1P24390 212 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 PPP1R2P41236 205 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 CAPZBP47756 277 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 SPINT3P49223 89 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 TMBIM6P55061 237 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 ARPP19P56211 112 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 GNG5P63218 68 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 MRPS15P82914 257 aaKnown RBP0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 DHRS4L2Q6PKH6 230 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 TMEM14EPQ6UXP3 125 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 Q6ZQY7 126 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 OR13C6PQ8NH95 151 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 SH3BGRL3Q9H299 93 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 PLAC8Q9NZF1 115 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 STOML2Q9UJZ1 356 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 PRNDQ9UKY0 176 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 UNC13CQ8NB66 2214 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 TRPM1Q7Z4N2 1603 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 ERBINQ96RT1 1412 aa0.19□□□□□ -2.38
HMGB1P29-201ENST00000505659 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 A0A0D9SG42 100 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZNF727A8MUV8 499 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CST7O76096 145 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 IFNA1P01562 189 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CD14P08571 375 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CXCL1P09341 107 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CCL4P13236 92 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 RPL35P42766 123 aaKnown RBP0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZNF137PP52743 207 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 SPINK7P58062 85 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 RPL19P84098 196 aaKnown RBP0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 POU6F1Q14863 301 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 SNCBQ16143 134 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 HACD4Q5VWC8 232 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 GLIPR1L1Q6UWM5 242 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 TMED4Q7Z7H5 227 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 FAM216BQ8N7L0 139 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 NUP35Q8NFH5 326 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 MCEEQ96PE7 176 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 GPX7Q96SL4 187 aaPredicted RBP0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 PAIP2Q9BPZ3 127 aaKnown RBP0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 RTL8AQ9BWD3 113 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 OR2H1Q9GZK4 316 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CST11Q9H112 138 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 LAMTOR3Q9UHA4 124 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 CD109Q6YHK3 1445 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 PIK3C2AO00443 1686 aa0.18□□□□□ -2.38
HMGB1P29-201ENST00000505659 C9orf170A2RU37 121 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 NUPR2A6NF83 97 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 C5orf67F2Z3F1 127 aa0.17□□□□□ -2.38
HMGB1P29-201ENST00000505659 K7ERJ3 54 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms