RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 MED31Q9Y3C7 131 aa1.69□□□□□ -2.14
GYPA-204ENST00000504786 SOX21Q9Y651 276 aaPredicted RBP1.69□□□□□ -2.14
GYPA-204ENST00000504786 HEATR5BQ9P2D3 2071 aa1.69□□□□□ -2.14
GYPA-204ENST00000504786 MED12LQ86YW9 2145 aa1.69□□□□□ -2.14
GYPA-204ENST00000504786 NCAPD3P42695 1498 aa1.69□□□□□ -2.14
GYPA-204ENST00000504786 COL4A5P29400 1685 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 N4BP2Q86UW6 1770 aaPredicted RBP1.68□□□□□ -2.14
GYPA-204ENST00000504786 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
GYPA-204ENST00000504786 E7EUB6 86 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 CNBPP62633 177 aaKnown RBP1.68□□□□□ -2.14
GYPA-204ENST00000504786 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 UNQ6190/PRO20217Q6UXQ8 127 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 FAM216BQ8N7L0 139 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 Q8N814 137 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 HYLS1Q96M11 299 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 TP53RKQ96S44 253 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 BATF3Q9NR55 127 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 MYOFQ9NZM1 2061 aa1.68□□□□□ -2.14
GYPA-204ENST00000504786 ZCCHC11Q5TAX3 1644 aaKnown RBP1.67□□□□□ -2.14
GYPA-204ENST00000504786 TRAV10A0A0B4J240 114 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
GYPA-204ENST00000504786 LYRM1O43325 122 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 IGLV1-51P01701 117 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 CD2P06729 351 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 DEFB119Q8N690 84 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 MUCL1Q96DR8 90 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 LXNQ9BS40 222 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 GGACTQ9BVM4 153 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 CHCHD2Q9Y6H1 151 aaPredicted RBP1.67□□□□□ -2.14
GYPA-204ENST00000504786 ADGBQ8N7X0 1667 aa1.67□□□□□ -2.14
GYPA-204ENST00000504786 IGKV2-40A0A087WW87 121 aaPredicted RBP1.66□□□□□ -2.14
GYPA-204ENST00000504786 IGHV1-58A0A0C4DH39 117 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 ARL5CA6NH57 179 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 ERC2-IT1O76042 136 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 IGKV2D-40P01614 121 aaPredicted RBP1.66□□□□□ -2.14
GYPA-204ENST00000504786 RPS3P23396 243 aaKnown RBP eCLIP1.66□□□□□ -2.143e-8■■■□□ 17.8
GYPA-204ENST00000504786 LINC00305Q7Z4B0 112 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 LRRC18Q8N456 261 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 TAS2R7Q9NYW3 318 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 BCL9O00512 1426 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 TRAPPC8Q9Y2L5 1435 aa1.66□□□□□ -2.14
GYPA-204ENST00000504786 COL4A1P02462 1669 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 RTL9Q8NET4 1388 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 IGKV3-7A0A075B6H7 116 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 A0A087WX48 190 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 hDV103S1A0JD37 113 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 HCRTO43612 131 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 FAM74A1Q5RGS3 127 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 TEX29Q8N6K0 151 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 OR5H6Q8NGV6 325 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 MCEEQ96PE7 176 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 AIF1LQ9BQI0 150 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 CDC42SE1Q9NRR8 79 aa1.65□□□□□ -2.15
GYPA-204ENST00000504786 ALPK2Q86TB3 2170 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 TRAV27A0A087WT01 109 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 MRPS36P82909 103 aaKnown RBP1.64□□□□□ -2.15
GYPA-204ENST00000504786 CIRBPQ14011 172 aaKnown RBP1.64□□□□□ -2.15
GYPA-204ENST00000504786 TMEM229BQ8NBD8 167 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 OR4B1Q8NGF8 309 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 SPANXA1Q9NS26 97 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 TNS3Q68CZ2 1445 aa1.64□□□□□ -2.15
GYPA-204ENST00000504786 A0A087WSZ3 146 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 TRAV13-1A0A0B4J241 112 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 C5orf58C9J3I9 102 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 H3BMG7 143 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 J3KT08 172 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 CCL16O15467 120 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 CXCL8P10145 99 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 IL9P15248 144 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 RPS28P62857 69 aaKnown RBP1.63□□□□□ -2.15
GYPA-204ENST00000504786 TMEM14EPQ6UXP3 125 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 ZNF833PQ6ZTB9 187 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 ARPINQ7Z6K5 226 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 GKN2Q86XP6 184 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 ZNF431Q8TF32 576 aaPredicted RBP1.63□□□□□ -2.15
GYPA-204ENST00000504786 PRELID3AQ96N28 172 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 TAF9BQ9HBM6 251 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 TPRKBQ9Y3C4 175 aa1.63□□□□□ -2.15
GYPA-204ENST00000504786 KDM6AO15550 1401 aaPredicted RBP1.63□□□□□ -2.15
GYPA-204ENST00000504786 NUP210Q8TEM1 1887 aaPredicted RBP1.63□□□□□ -2.15
GYPA-204ENST00000504786 SCN3AQ9NY46 2000 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 CEP192Q8TEP8 1941 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 PIK3C2AO00443 1686 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 SCGB1A1P11684 91 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 FABP4P15090 132 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 VMA21Q3ZAQ7 101 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 Q8TAT8 98 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 PATE1Q8WXA2 126 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 DIRC1Q969H9 104 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 BORCS5Q969J3 196 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 ORMDL1Q9P0S3 153 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 TRPM1Q7Z4N2 1603 aa1.62□□□□□ -2.15
GYPA-204ENST00000504786 TRBV7-6A0A0J9YX20 115 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 TRBV27A0A0K0K1C4 114 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 LOC107984640A0A0U1RRK4 108 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 LOC105371267A0A1B0GV96 52 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 C5orf67F2Z3F1 127 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 F8W1H4 67 aa1.61□□□□□ -2.15
GYPA-204ENST00000504786 GEMIN2O14893 280 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms