RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TMEM18Q96B42 140 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 GPR61Q9BZJ8 451 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 MRPL18Q9H0U6 180 aaKnown RBP7.63□□□□□ -1.19
COL1A1-210ENST00000504289 RPP21Q9H633 154 aaKnown RBP7.63□□□□□ -1.19
COL1A1-210ENST00000504289 ZNF331Q9NQX6 463 aaPredicted RBP7.63□□□□□ -1.19
COL1A1-210ENST00000504289 SERTAD4Q9NUC0 356 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 LRRK2Q5S007 2527 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 DIRC3C9JPN6 131 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 IGLV2-11P01706 119 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 P01737 135 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 IGHV4-38-2P0DP08 117 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
COL1A1-210ENST00000504289 PAFAH1B2P68402 229 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 PSG3Q16557 428 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 OR10J3Q5JRS4 329 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 SAPCD1Q5SSQ6 148 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 DMRTA1Q5VZB9 504 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 Q6AWC8 147 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 PRSS57Q6UWY2 283 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 TOMM20LQ6UXN7 152 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 TMEM136Q6ZRR5 245 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 C9orf139Q6ZV77 190 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 GOLT1AQ6ZVE7 132 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 OR5R1Q8NH85 324 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
COL1A1-210ENST00000504289 HIST1H2BLQ99880 126 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 SLC50A1Q9BRV3 221 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 ZFAND3Q9H8U3 227 aa7.62□□□□□ -1.19
COL1A1-210ENST00000504289 COL12A1Q99715 3063 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 A0A0G2JLM5 398 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 A0A1B0GW15 77 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 RBAKDNA6NC62 111 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 SNURFLB1AK76 121 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 BUB3O43684 328 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 CRISP2P16562 243 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
COL1A1-210ENST00000504289 GPR183P32249 361 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 IER3P46695 156 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 SRSF1Q07955 248 aaKnown RBP eCLIP7.61□□□□□ -1.19
COL1A1-210ENST00000504289 CYB5R2Q6BCY4 276 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 BRD3OSQ6XYD6 125 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 RBPMS2Q6ZRY4 209 aaKnown RBP7.61□□□□□ -1.19
COL1A1-210ENST00000504289 GBGT1Q8N5D6 347 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 TEX29Q8N6K0 151 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 CCDC140Q96MF4 163 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 METTL26Q96S19 204 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 PSG8Q9UQ74 426 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 U3KQE9 123 aa7.61□□□□□ -1.19
COL1A1-210ENST00000504289 G3V318 75 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 H3BUX3 64 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 NDUFA4O00483 81 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 FABP4P15090 132 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 CBLN1P23435 193 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 SRSF2Q01130 221 aaKnown RBP7.6□□□□□ -1.19
COL1A1-210ENST00000504289 FAM162BQ5T6X4 162 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 EXOC3-AS1Q8N2X6 119 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 CIARTQ8N365 385 aaPredicted RBP7.6□□□□□ -1.19
COL1A1-210ENST00000504289 NUP35Q8NFH5 326 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 NIT2Q9NQR4 276 aa7.6□□□□□ -1.19
COL1A1-210ENST00000504289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.59□□□□□ -1.19
COL1A1-210ENST00000504289 A0A1B0GXF2 115 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 LINC01548A6NM66 108 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 FSHBP01225 129 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 IGLV1-40P01703 118 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 AMBPP02760 352 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 TRGV3P03979 118 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 CT45A10P0DMU9 189 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 COL8A1P27658 744 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
COL1A1-210ENST00000504289 DEFB113Q30KQ7 82 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 GFI1BQ5VTD9 330 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 PRR27Q6MZM9 219 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 CLEC19AQ6UXS0 136 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 PRNTQ86SH4 94 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 TMEM219Q86XT9 240 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 NEU1Q99519 415 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 S4R3C0 116 aa7.59□□□□□ -1.19
COL1A1-210ENST00000504289 IGHV3OR16-10A0A075B7F0 116 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 A0A1W2PS18 150 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 CLPSL1A2RUU4 121 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 A8MWP6 167 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 H3BTX0 84 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 APCSP02743 223 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 BMI1P35226 326 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 RPS20P60866 119 aaKnown RBP7.58□□□□□ -1.2
COL1A1-210ENST00000504289 HBBP68871 147 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 PYY3Q5JQD4 70 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 SAMD13Q5VXD3 122 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 C17orf77Q96MU5 243 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 PRDM13Q9H4Q3 707 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 PPP1R14DQ9NXH3 145 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 SMAD5-AS1Q9Y6J3 95 aa7.58□□□□□ -1.2
COL1A1-210ENST00000504289 ANKRD17O75179 2603 aaKnown RBP7.57□□□□□ -1.2
COL1A1-210ENST00000504289 ZNF785A8K8V0 405 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 HAX1O00165 279 aa7.57□□□□□ -1.2
COL1A1-210ENST00000504289 IGHV3-23P01764 117 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms