RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
CYSTM1-202ENST00000504227 ZNF503Q96F45 646 aa10.43□□□□□ -0.74
CYSTM1-202ENST00000504227 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
CYSTM1-202ENST00000504227 TRRAPQ9Y4A5 3859 aa10.43□□□□□ -0.74
CYSTM1-202ENST00000504227 SNRPCP09234 159 aaKnown RBP10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 PSMB3P49720 205 aa10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 ZNF586Q9NXT0 402 aa10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 SORL1Q92673 2214 aa10.42□□□□□ -0.74
CYSTM1-202ENST00000504227 TRBV19A0A075B6N1 114 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 TRAV2A0A0B4J234 112 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 IZUMO1RA6ND01 250 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 OR4C46A6NHA9 309 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 H3BTX0 84 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 ID1P41134 155 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 TFPI2P48307 235 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 PPT1P50897 306 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 PDE6HQ13956 83 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 SUN5Q8TC36 379 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 C16orf92Q96LL3 132 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 C17orf77Q96MU5 243 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 TMPRSS5Q9H3S3 457 aa10.41□□□□□ -0.74
CYSTM1-202ENST00000504227 WIPF1O43516 503 aa10.4□□□□□ -0.74
CYSTM1-202ENST00000504227 PSG9Q00887 426 aa10.4□□□□□ -0.74
CYSTM1-202ENST00000504227 PCNPQ8WW12 178 aaKnown RBP10.4□□□□□ -0.74
CYSTM1-202ENST00000504227 SLC50A1Q9BRV3 221 aa10.4□□□□□ -0.74
CYSTM1-202ENST00000504227 PKD1L1Q8TDX9 2849 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 MGAM2Q2M2H8 2515 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 K7EQG2 157 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 ISLRO14498 428 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 ZNF253O75346 499 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 IFNA1P01562 189 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 NMBP08949 121 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 RANP62826 216 aaKnown RBP10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 CCL20P78556 96 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 LYPD1Q8N2G4 141 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 LYPD6BQ8NI32 183 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 DCANP1Q8TF63 244 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 ZMAT5Q9UDW3 170 aaKnown RBP10.39□□□□□ -0.75
CYSTM1-202ENST00000504227 RGS13O14921 159 aa10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 NDUFB4O95168 129 aa10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 CMC4P56277 68 aaPredicted RBP10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 SNRPD3P62318 126 aaKnown RBP10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 ZNF331Q9NQX6 463 aaPredicted RBP10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 GNG13Q9P2W3 67 aa10.38□□□□□ -0.75
CYSTM1-202ENST00000504227 A0A1W2PRE2 83 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 SLC17A3O00476 420 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 SOCS3O14543 225 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 UBE2G2P60604 165 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 PMS2P11Q13670 270 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 CLLU1Q5K131 121 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 LINC00052Q96N35 136 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 Q9H3A6 140 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 PRELID1Q9Y255 219 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 CMYA5Q8N3K9 4069 aa10.37□□□□□ -0.75
CYSTM1-202ENST00000504227 PGPA6NDG6 321 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 PAGE4O60829 102 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 ZNF688P0C7X2 276 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 TAGLN2P37802 199 aaKnown RBP10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 ICAM4Q14773 271 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 PSG3Q16557 428 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 BEAN1Q3B7T3 259 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 CST9LP1Q5W188 147 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 IGFL4Q6B9Z1 124 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 OTORQ9NRC9 128 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 ZNF256Q9Y2P7 627 aaPredicted RBP10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 ARL2-SNX15V9GYD0 113 aa10.36□□□□□ -0.75
CYSTM1-202ENST00000504227 TRAV8-2A0A0B4J237 113 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 FAM74A7A6NL05 159 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 CSN1S1P47710 185 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 SUMO1P63165 101 aaKnown RBP10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 PSMG4Q5JS54 123 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
CYSTM1-202ENST00000504227 G3V4G9 280 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 SLC25A5P05141 298 aaKnown RBP10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 HLA-DMBP28068 263 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 HAGHQ16775 308 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 SAMD5Q5TGI4 173 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 GTSCR1Q86UQ5 136 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 C20orf173Q96LM9 149 aa10.34□□□□□ -0.75
CYSTM1-202ENST00000504227 RBFOX3A6NFN3 312 aa10.33□□□□□ -0.76
CYSTM1-202ENST00000504227 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
CYSTM1-202ENST00000504227 BCL2P10415 239 aa10.33□□□□□ -0.76
CYSTM1-202ENST00000504227 DEFB131AP59861 70 aa10.33□□□□□ -0.76
CYSTM1-202ENST00000504227 EGFEM1PQ0D2K5 195 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms