RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 RPUSD4Q96CM3 377 aaKnown RBP11.64□□□□□ -0.55
POLR2J3-208ENST00000504101 GAGE12BA1L429 117 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 WRBO00258 174 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 SYNGR2O43760 224 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 GAGE7O76087 117 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 RLN2P04090 185 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 IL5P05113 134 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 GAGE12FP0CL80 117 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 GAGE12GP0CL81 117 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 GAGE12IP0CL82 117 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 SLC25A6P12236 298 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 SPANXN5Q5MJ07 72 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 Q6ZRN7 208 aaPredicted RBP11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 CYP2G1PQ6ZSU1 146 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 CCDC28AQ8IWP9 274 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 VPS13BQ7Z7G8 4022 aa11.63□□□□□ -0.55
POLR2J3-208ENST00000504101 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 H3BP45 60 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 HYPMO75409 117 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 OR5G3P0C626 314 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 LINC00869P0C866 280 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 FUSP35637 526 aaKnown RBP eCLIP11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 KIR3DS1Q14943 382 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 Q5VSD8 79 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 DIRAS2Q96HU8 199 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 RABL2AQ9UBK7 228 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
POLR2J3-208ENST00000504101 FLG2Q5D862 2391 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 EREGO14944 169 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 XGP55808 180 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 TMED4Q7Z7H5 227 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 FRZBQ92765 325 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
POLR2J3-208ENST00000504101 PLP1P60201 277 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 GFI1BQ5VTD9 330 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 CDPF1Q6NVV7 123 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 S100A7AQ86SG5 101 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 LRTM2Q8N967 370 aa11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 STRAPQ9Y3F4 350 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-208ENST00000504101 A0A096LPF7 62 aa11.59□□□□□ -0.55
POLR2J3-208ENST00000504101 VAMP1P23763 118 aa11.59□□□□□ -0.55
POLR2J3-208ENST00000504101 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
POLR2J3-208ENST00000504101 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
POLR2J3-208ENST00000504101 PMS2P5A8MQ11 134 aa11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 MRPS12O15235 138 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 SIVA1O15304 175 aa11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 CXCL2P19875 107 aa11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 ANXA7P20073 488 aaKnown RBP11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 SELENOTP62341 195 aa11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 LCN15Q6UWW0 184 aa11.58□□□□□ -0.56
POLR2J3-208ENST00000504101 SPCS2Q15005 226 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 Q6ZTI0 123 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 SLC50A1Q9BRV3 221 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 ARL6Q9H0F7 186 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 ZNF331Q9NQX6 463 aaPredicted RBP11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 RSL24D1Q9UHA3 163 aaKnown RBP11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 RNF24Q9Y225 148 aa11.57□□□□□ -0.56
POLR2J3-208ENST00000504101 J3KRW8 73 aa11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 HOXB5P09067 269 aa11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 DAZ2Q13117 558 aaKnown RBP11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
POLR2J3-208ENST00000504101 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-208ENST00000504101 TRGV2A0A075B6R0 118 aa11.55□□□□□ -0.56
POLR2J3-208ENST00000504101 SFT2D2O95562 160 aa11.55□□□□□ -0.56
POLR2J3-208ENST00000504101 SNRPCP09234 159 aaKnown RBP11.55□□□□□ -0.56
POLR2J3-208ENST00000504101 SMIM18P0DKX4 95 aa11.55□□□□□ -0.56
POLR2J3-208ENST00000504101 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 PRAC2D3DTV9 90 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 NXPH4O95158 308 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 IFNA5P01569 189 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 DNAH10OSP0CZ25 163 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 KRTAP10-1P60331 282 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 RRAS2P62070 204 aaPredicted RBP11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 SLC38A11Q08AI6 406 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 PYGO2Q9BRQ0 406 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 PSENENQ9NZ42 101 aa11.54□□□□□ -0.56
POLR2J3-208ENST00000504101 SLC17A3O00476 420 aa11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 LEPP41159 167 aa11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 POLR2GP62487 172 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 LINC00305Q7Z4B0 112 aa11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 CCDC59Q9P031 241 aaKnown RBP11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
POLR2J3-208ENST00000504101 A0A087WTM6 91 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 LINC00854A0A1B0GVQ3 168 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 H3BTX0 84 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 K7EPK0 472 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 CCNKO75909 580 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 ICAM4Q14773 271 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 PXDC1Q5TGL8 231 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 NFE4Q86UQ8 179 aa11.52□□□□□ -0.57
POLR2J3-208ENST00000504101 BPIFA4PQ86YQ2 179 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms