RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 GPHB5Q86YW7 130 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 TMEM167AQ8TBQ9 72 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 EEF1AKMT3Q96AZ1 226 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 COMMD5Q9GZQ3 224 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 HRASLSQ9HDD0 168 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 SLC2A9Q9NRM0 540 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 SHPKQ9UHJ6 478 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 ANXA10Q9UJ72 324 aa3.18□□□□□ -1.9
NIPBL-203ENST00000503274 RRP15Q9Y3B9 282 aaKnown RBP3.18□□□□□ -1.9
NIPBL-203ENST00000503274 TRAV25A0A0B4J276 109 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 LCE6AA0A183 80 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 A0A1B0GVX0 72 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 TMEM235A6NFC5 223 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 C2orf70A6NJV1 201 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 RBFOX2O43251 390 aaKnown RBP eCLIP3.17□□□□□ -1.9
NIPBL-203ENST00000503274 HPRT1P00492 218 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 TRBV12-3P01733 135 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 PRH1P02810 166 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 CRYGCP07315 174 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 ZNF735P0CB33 412 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 NQO2P16083 231 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 HLA-GP17693 338 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 CBLN1P23435 193 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 PSMB6P28072 239 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 RORCP51449 518 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 TAS2R31P59538 309 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 DEFB114Q30KQ6 69 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 UBE2UQ5VVX9 321 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 LAMTOR1Q6IAA8 161 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 SFXN4Q6P4A7 337 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 PLET1Q6UQ28 207 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 CLEC19AQ6UXS0 136 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 SSX9Q7RTT3 188 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 CMTM1Q8IZ96 169 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 RNF182Q8N6D2 247 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 ZNF709Q8N972 641 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 OR1L6Q8NGR2 347 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 S100A16Q96FQ6 103 aaKnown RBP3.17□□□□□ -1.9
NIPBL-203ENST00000503274 EDA2RQ9HAV5 297 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 VCX3AQ9NNX9 186 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 IFT46Q9NQC8 304 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 TXNL4BQ9NX01 149 aaKnown RBP3.17□□□□□ -1.9
NIPBL-203ENST00000503274 RHBDL2Q9NX52 303 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 FKBP11Q9NYL4 201 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 BET1LQ9NYM9 111 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 TAS2R8Q9NYW2 309 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 UFC1Q9Y3C8 167 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 STARD9Q9P2P6 4700 aa3.17□□□□□ -1.9
NIPBL-203ENST00000503274 LOC102724200A0A096LPH7 203 aaPredicted RBP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 LOC100506127A0A0U1RQW1 187 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 IZUMO1RA6ND01 250 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 PPP5D1E7EU14 171 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 EIF3GO75821 320 aaKnown RBP eCLIP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 SNAPC5O75971 98 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 PPYP01298 95 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 TRAPPC2P0DI81 140 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 TRAPPC2BP0DI82 140 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 CTRB1P17538 263 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 SDC2P34741 201 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 CMC4P56277 68 aaPredicted RBP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 TAS2R46P59540 309 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 FXYD4P59646 89 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 RPL30P62888 115 aaKnown RBP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 DEFA5Q01523 94 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 MXD1Q05195 221 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 ERCC8Q13216 396 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 POU2AF1Q16633 256 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 C10orf55Q5SWW7 151 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 IDNKQ5T6J7 187 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 LPCAT3Q6P1A2 487 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 LYPD1Q8N2G4 141 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 DEFB125Q8N687 156 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 OR1L8Q8NGR8 309 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 LGALS14Q8TCE9 139 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 TMEM56Q96MV1 263 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 TSC22D3Q99576 134 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 GGTLC1Q9BX51 225 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 C6orf62Q9GZU0 229 aaPredicted RBP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 ZC4H2Q9NQZ6 224 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 COMMD9Q9P000 198 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 MRPL27Q9P0M9 148 aaKnown RBP3.16□□□□□ -1.9
NIPBL-203ENST00000503274 RYR2Q92736 4967 aa3.16□□□□□ -1.9
NIPBL-203ENST00000503274 SMIM31A0A1B0GVY4 71 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 A8MWP6 167 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 SULT1C2O00338 296 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 UPK2O00526 184 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 HLA-AP01891 365 aaKnown RBP3.15□□□□□ -1.91
NIPBL-203ENST00000503274 CD5P06127 495 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 CD7P09564 240 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 OR13C7P0DN81 318 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 F2RP25116 425 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 BMI1P35226 326 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 OR2B8PP59922 312 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 KLK9Q2XQG4 91 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 C6orf226Q5I0X4 101 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 AADACL3Q5VUY0 350 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 ZNF773Q6PK81 442 aa3.15□□□□□ -1.91
NIPBL-203ENST00000503274 LINC00322Q6ZN03 302 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms