RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 DIP2CQ9Y2E4 1556 aa3.88□□□□□ -1.79
NEAT1-202ENST00000501122 MAST1Q9Y2H9 1570 aa3.88□□□□□ -1.79
NEAT1-202ENST00000501122 FOXF1Q12946 379 aa3.88□□□□□ -1.79
NEAT1-202ENST00000501122 TRGV9Q99603 122 aa3.88□□□□□ -1.79
NEAT1-202ENST00000501122 SCN10AQ9Y5Y9 1956 aa3.88□□□□□ -1.79
NEAT1-202ENST00000501122 COL1A1P02452 1464 aaPredicted RBP3.88□□□□□ -1.79
NEAT1-202ENST00000501122 YPEL4Q96NS1 127 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 FER1L6Q2WGJ9 1857 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 CDK2AP2O75956 126 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 NPPCP23582 126 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 DYNAPQ8N1N2 210 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 PIFOQ8TCI5 191 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 BADQ92934 168 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 PRSS38A1L453 326 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 WISP1O95388 367 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 ZNF826PQ6ZT77 177 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 M0R1B8 84 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 SPRY3O43610 288 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 DTX1Q86Y01 620 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 CYYR1Q96J86 154 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 INSL3P51460 131 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 TREML4Q6UXN2 200 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 RPL18AQ02543 176 aaKnown RBP3.87□□□□□ -1.79
NEAT1-202ENST00000501122 CBLN3Q6UW01 205 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 ZNRF2Q8NHG8 242 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 C17orf98A8MV24 154 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV3D-15A0A087WSY6 115 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV3-15P01624 115 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 CD24P25063 80 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 IGLV1-36A0A0B4J1U3 117 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 PRSS46E5RG02 174 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 M0R1W7 72 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 TMEM74BQ9NUR3 256 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 ZNF492Q9P255 531 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 SDIM1Q6ZPB5 146 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 UPK3BQ9BT76 320 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 IGHV1OR15-9A0A0B4J2B8 117 aa3.87□□□□□ -1.79
NEAT1-202ENST00000501122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.87□□□□□ -1.79
NEAT1-202ENST00000501122 PRR19A6NJB7 356 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 CXCL12P48061 93 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 CCL11P51671 97 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 ORMDL1Q9P0S3 153 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 H0YGX0 51 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 CCDC88AQ3V6T2 1871 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 TFF1P04155 84 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 P0DMU3 169 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 FAM231AP0DMU4 169 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 FAM231CP0DMU5 169 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 GATA1P15976 413 aaPredicted RBP3.86□□□□□ -1.79
NEAT1-202ENST00000501122 ZIC1Q15915 447 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 ERCC8Q13216 396 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 ZNF329Q86UD4 541 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 NDUFA12Q9UI09 145 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 PYGO1Q9Y3Y4 419 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 YLPM1P49750 1951 aaKnown RBP3.86□□□□□ -1.79
NEAT1-202ENST00000501122 HIST2H2BCQ6DN03 193 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 HIST2H2BDQ6DRA6 164 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 C16orf47Q6ZP98 133 aaPredicted RBP3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IL9P15248 144 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 LY6DQ14210 128 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 MRPL51Q4U2R6 128 aaKnown RBP3.86□□□□□ -1.79
NEAT1-202ENST00000501122 DEPDC5O75140 1603 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 TIMM21Q9BVV7 248 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 SNED1Q8TER0 1413 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV6D-21A0A0A0MT36 114 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 PAX8Q06710 450 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IGLV3-16A0A075B6K0 115 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 INS-IGF2F8WCM5 200 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 INSP01308 110 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 FOLR3P41439 243 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 ATP5EP2Q5VTU8 51 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 TRAV26-2A0A0B4J265 109 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV1D-13A0A0B4J2D9 117 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV1-13P0DP09 117 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 DIP2AQ14689 1571 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 H3BQ85 93 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 NXPH4O95158 308 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 C1orf53Q5VUE5 145 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 SMCHD1A6NHR9 2005 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 DENND4AQ7Z401 1863 aa3.86□□□□□ -1.79
NEAT1-202ENST00000501122 FOXE3Q13461 319 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 PRIMA1Q86XR5 153 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 SLIT3O75094 1523 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 WIPF1O43516 503 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 DSCR4P56555 118 aaPredicted RBP3.85□□□□□ -1.79
NEAT1-202ENST00000501122 SHROOM2Q13796 1616 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 KIR2DL5BQ8NHK3 375 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 NBR2O15453 112 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 TMEM200BQ69YZ2 307 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 SLC25A47Q6Q0C1 308 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 NDUFA11Q86Y39 141 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 LINC00312Q9Y6C7 94 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
NEAT1-202ENST00000501122 NDPQ00604 133 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 C1orf210Q8IVY1 113 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 IGKV1D-8A0A087WSZ0 117 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 CROCC2H7BZ55 1655 aa3.85□□□□□ -1.79
NEAT1-202ENST00000501122 FRMPD1Q5SYB0 1578 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms