RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 GPR82Q96P67 336 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 MTFP1Q9UDX5 166 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 H3BNG1 76 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 IGHV3-53P01767 116 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 CXCL3P19876 107 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 TBPP20226 339 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 CCR6P51684 374 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 TAS2R19P59542 299 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 VBP1P61758 197 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 NCS1P62166 190 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 AKR1C1Q04828 323 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 NFE4Q86UQ8 179 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 OR4D5Q8NGN0 318 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 IL22RA2Q969J5 263 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 RPUSD4Q96CM3 377 aaKnown RBP6.2□□□□□ -1.42
CCDC171-209ENST00000498725 Q9H521 79 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 EXTL2Q9UBQ6 330 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 TMEM56-RWDD3S4R434 201 aa6.2□□□□□ -1.42
CCDC171-209ENST00000498725 IGLV5-52A0A0A0MRZ9 124 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 SMCO3A2RU48 225 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 DISC1C4P0D8 188 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 H3BRN7 92 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 H3BTX0 84 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 CFDP00746 253 aaPredicted RBP6.19□□□□□ -1.42
CCDC171-209ENST00000498725 OR5G3P0C626 314 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 AKR1C4P17516 323 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 RAP2BP61225 183 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 GFI1BQ5VTD9 330 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 SYT8Q8NBV8 401 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 YIPF6Q96EC8 236 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 CACFD1Q9UGQ2 172 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 HIGD1AQ9Y241 93 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 KCNIP3Q9Y2W7 256 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 ICOSQ9Y6W8 199 aa6.19□□□□□ -1.42
CCDC171-209ENST00000498725 TRGV1A0A0A0MS02 117 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 WRBO00258 174 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 PAX4O43316 350 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 RPL7P18124 248 aaKnown RBP6.18□□□□□ -1.42
CCDC171-209ENST00000498725 ANXA7P20073 488 aaKnown RBP6.18□□□□□ -1.42
CCDC171-209ENST00000498725 MZT2AQ6P582 158 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 SHANK2-AS3Q9BTD1 123 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 MSRB1Q9NZV6 116 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
CCDC171-209ENST00000498725 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-209ENST00000498725 PRAC2D3DTV9 90 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 H3BP45 60 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 PSCAO43653 123 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 IL5P05113 134 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 S100A7P31151 101 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 ATP5IP56385 69 aaPredicted RBP6.17□□□□□ -1.42
CCDC171-209ENST00000498725 SERTAD4-AS1Q5TG53 156 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 CYP2G1PQ6ZSU1 146 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 OR51S1Q8NGJ8 323 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 TMEM70Q9BUB7 260 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 LY96Q9Y6Y9 160 aa6.17□□□□□ -1.42
CCDC171-209ENST00000498725 A0A0B4J2A0 478 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 LINC00854A0A1B0GVQ3 168 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 A6NJY4 79 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 PMS2P5A8MQ11 134 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 PRAF2O60831 178 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 HYPMO75409 117 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
CCDC171-209ENST00000498725 LINC00869P0C866 280 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 SURF2Q15527 256 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-209ENST00000498725 SPANXN5Q5MJ07 72 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 LYPD5Q6UWN5 251 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 CLVS1Q8IUQ0 354 aaPredicted RBP6.16□□□□□ -1.42
CCDC171-209ENST00000498725 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 ARL6Q9H0F7 186 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 SHPKQ9UHJ6 478 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 KLF12Q9Y4X4 402 aa6.16□□□□□ -1.42
CCDC171-209ENST00000498725 A0A087X0K7 114 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 PRSS46E5RG02 174 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-209ENST00000498725 AKAIN1P0CW23 69 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 EVI2AP22794 236 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.42
CCDC171-209ENST00000498725 DAZ2Q13117 558 aaKnown RBP6.15□□□□□ -1.42
CCDC171-209ENST00000498725 ACOT7LQ6ZUV0 252 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 LINC00467Q9BRT7 94 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 FUNDC2Q9BWH2 189 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
CCDC171-209ENST00000498725 MRPL16Q9NX20 251 aaKnown RBP6.15□□□□□ -1.42
CCDC171-209ENST00000498725 E5RGE8 158 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 SLC17A3O00476 420 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 RGS5O15539 181 aa6.14□□□□□ -1.43
CCDC171-209ENST00000498725 SYNGR2O43760 224 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms