RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PDE6GP18545 87 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 MPZP25189 248 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 CHI3L1P36222 383 aaPredicted RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 SSR4P51571 173 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 LIM2P55344 173 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 LOXL1Q08397 574 aaPredicted RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 OR8B8Q15620 311 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 Q6P435 159 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 TCF24Q7RTU0 167 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 OR2T10Q8NGZ9 312 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 ZNF675Q8TD23 568 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SLCO4A1Q96BD0 722 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 EMC6Q9BV81 110 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 BANF2Q9H503 90 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 EHFQ9NZC4 300 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 ANKRD12Q6UB98 2062 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 TRBV9A0A0B4J1U6 114 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 A0A1W2PNN7 141 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 FAM159BA6NKW6 160 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SMIM23A6NLE4 172 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 C17orf100A8MU93 164 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 H7C1C5 153 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 I3L3M4 83 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 CLDN5O00501 218 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 LCN6P62502 163 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 POU6F1Q14863 301 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 P2RY6Q15077 328 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SPANXN4Q5MJ08 99 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 FAM182AQ5T1J6 154 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 MRM1Q6IN84 353 aaKnown RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 GUSBP11Q6P575 273 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 FAM89BQ8N5H3 189 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 MRPL30Q8TCC3 161 aaKnown RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 IMMP1LQ96LU5 166 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 GNB1LQ9BYB4 327 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 GOLPH3Q9H4A6 298 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 RERGLQ9H628 205 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SLA2Q9H6Q3 261 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 MARCH5Q9NX47 278 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 PSORS1C1Q9UIG5 152 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 V9GYQ6 96 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 DOCK1Q14185 1865 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 CMYA5Q8N3K9 4069 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 A0A1B0GV50 99 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SERTM2A0A1B0GWG4 89 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 C17orf98A8MV24 154 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SOCS3O14543 225 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 DAZ2Q13117 558 aaKnown RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 ZNHIT3Q15649 155 aaPredicted RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 C6orf120Q7Z4R8 191 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 GID4Q8IVV7 300 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 Q8N1X5 172 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 MRPL43Q8N983 215 aaKnown RBP1.03□□□□□ -2.24
XRN1-214ENST00000498077 JOSD2Q8TAC2 188 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 UBALD1Q8TB05 177 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 RPEQ96AT9 228 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 Q96M85 177 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 OR2A5Q96R48 311 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 CLIC5Q9NZA1 410 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 TNFRSF18Q9Y5U5 241 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SSPOA2VEC9 5147 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 SCN10AQ9Y5Y9 1956 aa1.03□□□□□ -2.24
XRN1-214ENST00000498077 IGLV5-37A0A075B6J1 123 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 TRAV6A0A075B6T7 132 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 TRDV1A0A1B0GX56 115 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 CLDN24A6NM45 220 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 B4DXG7 233 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 F8VRH5 84 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 H3BSA7 217 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 GNGT2O14610 69 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 PAGE4O60829 102 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 HAND1O96004 215 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 PTHP01270 115 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 HLA-DRB4P13762 266 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 CD58P19256 250 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 HSD11B1P28845 292 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 ACTL10Q5JWF8 245 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 CLDN22Q8N7P3 220 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 CENPMQ9NSP4 180 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 HLA-DRB4X5D2U9 266 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 ZNF106Q9H2Y7 1883 aaKnown RBP1.03□□□□□ -2.25
XRN1-214ENST00000498077 TRRAPQ9Y4A5 3859 aa1.03□□□□□ -2.25
XRN1-214ENST00000498077 IGHV1-24A0A0C4DH33 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IFITM5A6NNB3 132 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 IGHV3-33P01772 117 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 AP3S2P59780 193 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SNRPD2P62316 118 aaKnown RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 PDCD1Q15116 288 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 METTL23Q86XA0 190 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 OR6N2Q8NGY6 317 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 Q8WTZ3 238 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 SFT2D1Q8WV19 159 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CIB3Q96Q77 187 aaPredicted RBP1.02□□□□□ -2.25
XRN1-214ENST00000498077 KRTAP3-1Q9BYR8 98 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TTTY12Q9BZ98 90 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 Q9H8V8 135 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TOMM7Q9P0U1 55 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 CLCF1Q9UBD9 225 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 TFR2Q9UP52 801 aa1.02□□□□□ -2.25
XRN1-214ENST00000498077 ARL2-SNX15V9GYD0 113 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms