RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 AMN1Q8IY45 258 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-215ENST00000497139 MAP1LC3AQ9H492 121 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
VEGFA-215ENST00000497139 TM4SF5O14894 197 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 CKS2P33552 79 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 UTF1Q5T230 341 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 PPDPFLQ8WWR9 84 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 IGKV3-15P01624 115 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 C3AR1Q16581 482 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 LYRM7Q5U5X0 104 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 ZNRF1Q8ND25 227 aa10.3□□□□□ -0.76
VEGFA-215ENST00000497139 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
VEGFA-215ENST00000497139 XGP55808 180 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 ZC2HC1BQ5TFG8 222 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 HIST1H4GQ99525 98 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 RPUSD1Q9UJJ7 312 aaKnown RBP10.29□□□□□ -0.76
VEGFA-215ENST00000497139 CACNA1EQ15878 2313 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 TMEM262E9PQX1 116 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 NPYP01303 97 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 SAP25Q8TEE9 199 aa10.29□□□□□ -0.76
VEGFA-215ENST00000497139 RALYQ9UKM9 306 aaKnown RBP10.29□□□□□ -0.76
VEGFA-215ENST00000497139 TRBV7-3A0A075B6L6 115 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 CGB1A6NKQ9 187 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 PRSS1P07477 247 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 IGHV1-2P23083 117 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 TMEM133Q9H2Q1 129 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 PRRG2O14669 202 aa10.28□□□□□ -0.76
VEGFA-215ENST00000497139 TNFRSF13BO14836 293 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-215ENST00000497139 TMEM213A2RRL7 107 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 COX8CQ7Z4L0 72 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 GTSCR1Q86UQ5 136 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 DEFB123Q8N688 67 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 OR4C13Q8NGP0 309 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 TPPP3Q9BW30 176 aa10.27□□□□□ -0.76
VEGFA-215ENST00000497139 E7EUB6 86 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 K7EM74 188 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 LHBP01229 141 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 IL4P05112 153 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 LEPP41159 167 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 CRIP1P50238 77 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 NCBP2LA6PVI3 153 aaKnown RBP10.27□□□□□ -0.77
VEGFA-215ENST00000497139 HOXA3O43365 443 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-215ENST00000497139 TNFRSF1AP19438 455 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 FXYD7P58549 80 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 HES3Q5TGS1 186 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 TEN1Q86WV5 123 aa10.27□□□□□ -0.77
VEGFA-215ENST00000497139 C1orf162Q8NEQ5 155 aaPredicted RBP10.27□□□□□ -0.77
VEGFA-215ENST00000497139 DSCAML1Q8TD84 2053 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 TNCP24821 2201 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 IGHV3OR15-7A0A075B7D8 119 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 TMEM8BA6NDV4 472 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 PLNP26678 52 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 SMCPP49901 116 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-215ENST00000497139 MEOX1P50221 254 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 EXOC3-AS1Q8N2X6 119 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 H3BTX0 84 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 CCL4P13236 92 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 GATA3P23771 443 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 PLGLAQ15195 96 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
VEGFA-215ENST00000497139 MOGAT3Q86VF5 341 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 FOXC2Q99958 501 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 SCNM1Q9BWG6 230 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 MRPL20Q9BYC9 149 aaKnown RBP10.26□□□□□ -0.77
VEGFA-215ENST00000497139 SIT1Q9Y3P8 196 aa10.26□□□□□ -0.77
VEGFA-215ENST00000497139 RAX2Q96IS3 184 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 TRBV7-9A0A0J9YWB2 115 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 IGHV3-48P01763 117 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 SRD5A1P18405 259 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 SRSF2Q01130 221 aaKnown RBP10.25□□□□□ -0.77
VEGFA-215ENST00000497139 FHL3Q13643 280 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 Q6ZT83 130 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 MUC3AQ02505 3323 aa10.25□□□□□ -0.77
VEGFA-215ENST00000497139 NCOR1O75376 2440 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 NTN3O00634 580 aaPredicted RBP10.24□□□□□ -0.77
VEGFA-215ENST00000497139 LYZL6O75951 148 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 PMS2CLQ68D20 193 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 RPEQ96AT9 228 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 LAMA1P25391 3075 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 ZNF688P0C7X2 276 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 VMA21Q3ZAQ7 101 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 CITED1Q99966 193 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 NGBQ9NPG2 151 aa10.24□□□□□ -0.77
VEGFA-215ENST00000497139 PI4KAP42356 2102 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 WFDC3Q8IUB2 231 aa10.23□□□□□ -0.77
VEGFA-215ENST00000497139 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms