RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CD3E	P07766	207 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	CD7	P09564	240 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	DUT	P33316	252 aa	Known RBP	6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	GFER	P55789	205 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	DEFB103A	P81534	67 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	SCNM1	Q9BWG6	230 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	MRPL35	Q9NZE8	188 aa	Known RBP	6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	SPTBN5	Q9NRC6	3674 aa	Known RBP	6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	AGFG2	O95081	481 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	CLPS	P04118	112 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	DIAPH2-AS1	Q14236	149 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	SLC25A53	Q5H9E4	307 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	TMEM240	Q5SV17	173 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	CRIP3	Q6Q6R5	217 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	FAM214B	Q7L5A3	538 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	SIGLEC9	Q9Y336	463 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	LYZL1	Q6UWQ5	148 aa		6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	6.6	□□□□□ -1.35
CRNKL1-205	ENST00000496549	USF3	Q68DE3	2245 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549		K7ESF4	209 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	TIMM8A	O60220	97 aa	Predicted RBP	6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	CD40	P25942	277 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549		Q86TA4	180 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	NFE4	Q86UQ8	179 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	TRGV9	Q99603	122 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	LINC00473	A8K010	186 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549	WISP1	O95388	367 aa		6.59	□□□□□ -1.35
CRNKL1-205	ENST00000496549		M0R2P5	195 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	CECR9	P0C854	216 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	LAGE3	Q14657	143 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	CXorf67	Q86X51	503 aa	Predicted RBP	6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PIFO	Q8TCI5	191 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZNF837	Q96EG3	531 aa	Predicted RBP	6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SPRY4	Q9C004	299 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	FOXA2	Q9Y261	457 aa	Predicted RBP	6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZDBF2	Q9HCK1	2354 aa		6.59	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGHV5-51	A0A0C4DH38	117 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGHG4	P01861	327 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TNFRSF1A	P19438	455 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	UCN	P55089	124 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	FOXF2	Q12947	444 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549		Q6ZPA2	131 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	HS3ST6	Q96QI5	342 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	MRPL20	Q9BYC9	149 aa	Known RBP	6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549		V9GYY9	64 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SMKR1	H3BMG3	65 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TCL1B	O95988	128 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	MRPL51	Q4U2R6	128 aa	Known RBP	6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549		Q6P435	159 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	COPS9	Q8WXC6	57 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	DUX3	Q96PT4	197 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	WDFY4	Q6ZS81	3184 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ACYP1	P07311	99 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PRSS2	P07478	247 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PRCD	Q00LT1	54 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	RSPO1	Q2MKA7	263 aa	Predicted RBP	6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	RPL39P5	Q59GN2	51 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549		Q8N1Y9	231 aa		6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	KLF13	Q9Y2Y9	288 aa	Predicted RBP	6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PTPRZ1	P23471	2315 aa	Predicted RBP	6.58	□□□□□ -1.36
CRNKL1-205	ENST00000496549	BDP1	A6H8Y1	2624 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGKV2D-26	A0A0A0MRZ7	120 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGKV3D-11	A0A0A0MRZ8	115 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	LOXL3	P58215	753 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	VMA21	Q3ZAQ7	101 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PRO0461	Q9UI25	63 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	URB1	O60287	2271 aa	Known RBP	6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZNF407	Q9C0G0	2248 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	LOC107984640	A0A0U1RRK4	108 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549		A0A1B0GX51	115 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	LILRA5	A6NI73	299 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549		F8VRH5	84 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ATOX1	O00244	68 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TCF15	Q12870	199 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZFP2	Q6ZN57	461 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TRGV11	A0A075B6L2	103 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TRAV3	A0A0B4J244	114 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	EFNA2	O43921	213 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGLC6	P0CF74	106 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SRSF2	Q01130	221 aa	Known RBP	6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ASCL5	Q7RTU5	278 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	TRANK1	O15050	2925 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SCN10A	Q9Y5Y9	1956 aa		6.57	□□□□□ -1.36
CRNKL1-205	ENST00000496549	WIPF1	O43516	503 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGHV4-34	P06331	123 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	DLX6	P56179	175 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SPANXN1	Q5VSR9	72 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZNF576	Q9H609	170 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	SDK1	Q7Z5N4	2213 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGHV3OR15-7	A0A075B7D8	119 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	PRDX2	P32119	198 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ORMDL2	Q53FV1	153 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ZNF503	Q96F45	646 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	ADAMTS9	Q9P2N4	1935 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	CDX4	O14627	284 aa	Predicted RBP	6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	IGHV3-48	P01763	117 aa		6.56	□□□□□ -1.36
CRNKL1-205	ENST00000496549	LOXL1	Q08397	574 aa	Predicted RBP	6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms