RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CCDC140Q96MF4 163 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 ARL2-SNX15V9GYD0 113 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 WI2-2373I1.2A0A1W2PRP0 233 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 SNURFLB1AK76 121 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TOMM40O96008 361 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 IGLC2P0DOY2 106 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 RHOGP84095 191 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TCEAL7Q9BRU2 100 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TBL2Q9Y4P3 447 aaKnown RBP8.08□□□□□ -1.12
SAMM50-206ENST00000494795 PRRC2AP48634 2157 aaKnown RBP8.08□□□□□ -1.12
SAMM50-206ENST00000494795 IGHV1-69DA0A0B4J2H0 117 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 IGHV1-69P01742 117 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 CLEC19AQ6UXS0 136 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 PACRGQ96M98 296 aaPredicted RBP8.08□□□□□ -1.12
SAMM50-206ENST00000494795 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
SAMM50-206ENST00000494795 HIF1ANQ9NWT6 349 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 SMAD5-AS1Q9Y6J3 95 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
SAMM50-206ENST00000494795 TRBV19A0A075B6N1 114 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 ZNF705FA8MVS1 300 aaPredicted RBP8.07□□□□□ -1.12
SAMM50-206ENST00000494795 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 MFAP4P55083 255 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 SIGLEC15Q6ZMC9 328 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 UBE2G1P62253 170 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 TMEM183BQ1AE95 376 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 TMEM183AQ8IXX5 376 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 LY96Q9Y6Y9 160 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 PAX1P15863 534 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 MLST8Q9BVC4 326 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 GNB4Q9HAV0 340 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 PITPNC1Q9UKF7 332 aa8.07□□□□□ -1.12
SAMM50-206ENST00000494795 OOSP1A8MZH6 123 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 H3BUX3 64 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 HIST1H1EP10412 219 aaKnown RBP8.06□□□□□ -1.12
SAMM50-206ENST00000494795 SLAQ13239 276 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 GTSF1Q8WW33 167 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 MBD6Q96DN6 1003 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 C8orf49Q96NF6 230 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 SRSF8Q9BRL6 282 aaKnown RBP8.06□□□□□ -1.12
SAMM50-206ENST00000494795 ATG101Q9BSB4 218 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 OSTCQ9NRP0 149 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 ITPR2Q14571 2701 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 SMIM27A0A1W2PRY6 76 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 RAB4AP20338 218 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 S100A2P29034 98 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 BRS3P32247 399 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 HIST2H2BDQ6DRA6 164 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 C10orf99Q6UWK7 81 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 NUP35Q8NFH5 326 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 RCHY1Q96PM5 261 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 NEU1Q99519 415 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 C1RLQ9NZP8 487 aa8.06□□□□□ -1.12
SAMM50-206ENST00000494795 CREBBPQ92793 2442 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 IGKV2-40A0A087WW87 121 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-206ENST00000494795 IGKV2D-40P01614 121 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-206ENST00000494795 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 RNF182Q8N6D2 247 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 KLF12Q9Y4X4 402 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 ACANP16112 2415 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 HELZ2Q9BYK8 2649 aaKnown RBP8.05□□□□□ -1.12
SAMM50-206ENST00000494795 HIGD1CA8MV81 97 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 LTAP01374 205 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 IGHG4P01861 327 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 MSMBP08118 114 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 CAMPP49913 170 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 CRIP1P50238 77 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 YPEL3P61236 119 aaPredicted RBP8.05□□□□□ -1.12
SAMM50-206ENST00000494795 TOMM20LQ6UXN7 152 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 Q8TAT8 98 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 ZNF502Q8TBZ5 544 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 ZC2HC1AQ96GY0 325 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 BTF3L4Q96K17 158 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 NAT8BQ9UHF3 227 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 ITPR3Q14573 2671 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 MUC21A0A0G2JKD1 596 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 MUC21A0A140T8X8 626 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 CLPSL1A2RUU4 121 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 EDN2P20800 178 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 IQCJQ1A5X6 159 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 MUC21Q5SSG8 566 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 BPIFA4PQ86YQ2 179 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 STXBP6Q8NFX7 210 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 GPR82Q96P67 336 aa8.05□□□□□ -1.12
SAMM50-206ENST00000494795 Q86TA4 180 aa8.04□□□□□ -1.12
SAMM50-206ENST00000494795 SERF1AO75920 110 aa8.04□□□□□ -1.12
SAMM50-206ENST00000494795 DEFB1P60022 68 aa8.04□□□□□ -1.12
SAMM50-206ENST00000494795 FAM110DQ8TAY7 271 aaPredicted RBP8.04□□□□□ -1.12
SAMM50-206ENST00000494795 TMEM14CQ9P0S9 112 aa8.04□□□□□ -1.12
SAMM50-206ENST00000494795 TRBV9A0A0B4J1U6 114 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 333.6 ms