RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 BMPR1BO00238 502 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 TRGV3P03979 118 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 FRMD6-AS1P0C7T7 363 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 IER3P46695 156 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 NDUFA6P56556 154 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 UBE2G1P62253 170 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 ATP5G2Q06055 141 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 HIST2H2BCQ6DN03 193 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 C9orf139Q6ZV77 190 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 LINC00518Q8N0U6 118 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 Q96MF0 132 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 PSMG3-AS1Q96PY0 264 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF580Q9UK33 172 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 FLNAP21333 2647 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 AKAP9Q99996 3911 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF785A8K8V0 405 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 H3BUA1 57 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 M0R3E3 92 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 IGLV1-40P01703 118 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 RPL7P18124 248 aaKnown RBP8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 AKR1D1P51857 326 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 PRSS57Q6UWY2 283 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 LINC00322Q6ZN03 302 aaPredicted RBP8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 OR8I2Q8N0Y5 310 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 NUDT10Q8NFP7 164 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 NUDT11Q96G61 164 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 TLN2Q9Y4G6 2542 aa8.2□□□□□ -1.1
PRPF4B-209ENST00000494674 GCN1Q92616 2671 aaKnown RBP8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 BUB3O43684 328 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 CA1P00915 261 aaPredicted RBP8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 IGHG4P01861 327 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 GFI1BQ5VTD9 330 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 KLK15Q9H2R5 256 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF492Q9P255 531 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 U3KQE9 123 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 UNC79Q9P2D8 2635 aa8.19□□□□□ -1.1
PRPF4B-209ENST00000494674 CCDC168Q8NDH2 2452 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 J3QKU1 62 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF253O75346 499 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 TRBV12-3P01733 135 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 CDX1P47902 265 aaPredicted RBP8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 TPPP2P59282 170 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 TMEM95Q3KNT9 176 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 COA6Q5JTJ3 125 aaKnown RBP8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 TMEM183AQ8IXX5 376 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 HIST3H2BBQ8N257 126 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 CMTM2Q8TAZ6 248 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 PRSS22Q9GZN4 317 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 GNB4Q9HAV0 340 aa8.18□□□□□ -1.1
PRPF4B-209ENST00000494674 A0A087X0K7 114 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF705GA8MUZ8 300 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 APOHP02749 345 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PRB4P10163 310 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 CBLN1P23435 193 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 TCL1AP56279 114 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PRR27Q6MZM9 219 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 GATCO43716 136 aaKnown RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PSG9Q00887 426 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 RELQ04864 619 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PSG3Q16557 428 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 C16orf54Q6UWD8 224 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 Q6YL49 198 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 LCNL1Q6ZST4 164 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PRNTQ86SH4 94 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 OR5R1Q8NH85 324 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 GRAMD2BQ96HH9 432 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 USMG5Q96IX5 58 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 PRDM13Q9H4Q3 707 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 SERTAD4Q9NUC0 356 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
PRPF4B-209ENST00000494674 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 S100A8P05109 93 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 ARL3P36405 182 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 RAB9AP51151 201 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 C1orf194Q5T5A4 169 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 ARL6IP6Q8N6S5 226 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 ZC2HC1AQ96GY0 325 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 ASCL2Q99929 193 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF331Q9NQX6 463 aaPredicted RBP8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 VPREB3Q9UKI3 123 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 PSG8Q9UQ74 426 aa8.16□□□□□ -1.1
PRPF4B-209ENST00000494674 IGHV3-66A0A0C4DH42 116 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 IZUMO1RA6ND01 250 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 ZNF207O43670 478 aaKnown RBP8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 PF4V1P10720 104 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 HLA-DMBP28068 263 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 S100A7P31151 101 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 MEOX2P50222 304 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 SLC35B1P78383 322 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 CT83Q5H943 113 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 UNQ9165/PRO28630Q6UXU0 137 aa8.15□□□□□ -1.1
PRPF4B-209ENST00000494674 TMEM136Q6ZRR5 245 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms