RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 RBPMS2Q6ZRY4 209 aaKnown RBP8.8□□□□□ -1
CHMP3-209ENST00000494623 ZC2HC1AQ96GY0 325 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 PSG8Q9UQ74 426 aa8.8□□□□□ -1
CHMP3-209ENST00000494623 F8W735 103 aaPredicted RBP8.79□□□□□ -1
CHMP3-209ENST00000494623 M0R143 59 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 C20orf144Q9BQM9 153 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 ZNF785A8K8V0 405 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 K7EQM0 130 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 M0R2Z0 102 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
CHMP3-209ENST00000494623 MINOS1Q5TGZ0 78 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 Q8N6K4 173 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 GFRA4Q9GZZ7 299 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 THYN1Q9P016 225 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 MINOS1-NBL1R4GNA1 71 aa8.79□□□□□ -1
CHMP3-209ENST00000494623 AKAP6Q13023 2319 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 IGHV3-35A0A0C4DH35 117 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 M0QZ24 198 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 EGR2P11161 476 aaPredicted RBP8.78□□□□□ -1
CHMP3-209ENST00000494623 SIRPDQ9H106 197 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 IGHV3OR16-8A0A075B7F1 116 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 IGHV7-81A0A0B4J1V7 117 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 OOSP1A8MZH6 123 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 CHEK1O14757 476 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 TCAPO15273 167 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 PSG3Q16557 428 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 LCN12Q6JVE5 192 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 HIVEP3Q5T1R4 2406 aa8.78□□□□□ -1
CHMP3-209ENST00000494623 FAM106CPP0CH98 169 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 EBI3Q14213 229 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 PMCHL1Q16048 86 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 CLEC2AQ6UVW9 174 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 S100A7AQ86SG5 101 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 ATOH7Q8N100 152 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 TMUB1Q9BVT8 246 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 AAMDCQ9H7C9 122 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 SOX21Q9Y651 276 aaPredicted RBP8.77□□□□□ -1.01
CHMP3-209ENST00000494623 CRIP1P50238 77 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 SPATA45Q537H7 98 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 Q8N9W7 124 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 OR4B1Q8NGF8 309 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 C8orf49Q96NF6 230 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 TPPP3Q9BW30 176 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 LPAR2Q9HBW0 351 aa8.77□□□□□ -1.01
CHMP3-209ENST00000494623 TRBV6-1A0A0K0K1D8 114 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 FAM231BA6NCW3 169 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 FAM181BA6NEQ2 426 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 SH2D7A6NKC9 451 aaPredicted RBP8.76□□□□□ -1.01
CHMP3-209ENST00000494623 CTSGP08311 255 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 RAB4AP20338 218 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 UQCRFS1P47985 274 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 EFNA4P52798 201 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 URB1-AS1Q96HZ7 61 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 IGHV2-70DA0A0C4DH43 119 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 ECSCRQ19T08 205 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 EBLN2Q6P2I7 272 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 BPESC1Q9GZL8 116 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 C1RLQ9NZP8 487 aa8.76□□□□□ -1.01
CHMP3-209ENST00000494623 C19orf84I3L1E1 186 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 CSN1S1P47710 185 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 UBE2E1P51965 193 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 IGFL4Q6B9Z1 124 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 UNQ5815/PRO19632Q6UWF5 114 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 ZNF48Q96MX3 618 aaPredicted RBP8.75□□□□□ -1.01
CHMP3-209ENST00000494623 ARMS2P0C7Q2 107 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 ZNF138P52744 262 aa8.75□□□□□ -1.01
CHMP3-209ENST00000494623 NUTF2P61970 127 aaKnown RBP8.75□□□□□ -1.01
CHMP3-209ENST00000494623 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 LOC102724200A0A096LPH7 203 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 A0A1B0GUT8 65 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 SAA4P35542 130 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 ITLN2Q8WWU7 325 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 AJUBAQ96IF1 538 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 CLEC5AQ9NY25 188 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 RABAC1Q9UI14 185 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 IGKV2-40A0A087WW87 121 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 GNLYP22749 145 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 LMO4P61968 165 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 PDE6HQ13956 83 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 BATFQ16520 125 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 CACNA1BQ00975 2339 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 LINC01548A6NM66 108 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 RPL7P18124 248 aaKnown RBP8.74□□□□□ -1.01
CHMP3-209ENST00000494623 GPR183P32249 361 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 CTRLP40313 264 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 PSG9Q00887 426 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 RIGQ13278 110 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 C15orf32Q32M92 178 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
CHMP3-209ENST00000494623 OVOL3O00110 214 aa8.73□□□□□ -1.01
CHMP3-209ENST00000494623 ATP6V0E1O15342 81 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms