RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 LYRM1O43325 122 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 KLF7O75840 302 aaPredicted RBP4.29□□□□□ -1.72
SNX13-210ENST00000494402 PMP2P02689 132 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 CD2P06729 351 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 SAA1P0DJI8 122 aaPredicted RBP4.29□□□□□ -1.72
SNX13-210ENST00000494402 S100A10P60903 97 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 ZNF79Q15937 498 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 GFRA4Q9GZZ7 299 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 NISCHQ9Y2I1 1504 aa4.29□□□□□ -1.72
SNX13-210ENST00000494402 LOC107986453A0A1B0GWG9 222 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 C16orf90A8MZG2 172 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 H7C2G1 150 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 OR1I1O60431 355 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 CD3DP04234 171 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 SLC25A4P12235 298 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 PCBD1P61457 104 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 PABPC1L2AQ5JQF8 200 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 Q6ZR54 194 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 AGPAT4-IT1Q9H0P7 198 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 Q9H521 79 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 NCKAP5O14513 1909 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 ATG2AQ2TAZ0 1938 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 ABCA7Q8IZY2 2146 aa4.28□□□□□ -1.72
SNX13-210ENST00000494402 ZNF407Q9C0G0 2248 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 KTN1Q86UP2 1357 aaKnown RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 ARHGAP21Q5T5U3 1957 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 MAPKBP1O60336 1514 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 MEGF6O75095 1541 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 PNMA8CA0A1B0GUJ8 204 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 WISP3O95389 354 aaPredicted RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 CPSF4O95639 269 aaKnown RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 CTSDP07339 412 aaPredicted RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 CRYGAP11844 174 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 CCL4P13236 92 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 ZNF90Q03938 601 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 Q56UQ5 140 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 MRPL54Q6P161 138 aaKnown RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 Q6ZUT4 128 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 OR5AS1Q8N127 324 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 Q8NAQ8 132 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 C5orf17Q8NAS9 161 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 CCL4L1Q8NHW4 92 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 RAB37Q96AX2 223 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 SEC11CQ9BY50 192 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 FKBP11Q9NYL4 201 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 TAS2R4Q9NYW5 299 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 RPL26L1Q9UNX3 145 aaKnown RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 TPRKBQ9Y3C4 175 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 CHCHD2Q9Y6H1 151 aaPredicted RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 HSPE1-MOB4S4R3N1 261 aa4.27□□□□□ -1.73
SNX13-210ENST00000494402 ZNF646O15015 1829 aaPredicted RBP4.27□□□□□ -1.73
SNX13-210ENST00000494402 A0A1B0GU33 70 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 C11orf86A6NJI1 115 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 GNRH2O43555 120 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 SPINK8P0C7L1 97 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 BRS3P32247 399 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 FAM27BQ5VT28 67 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 Q6ZS52 159 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 SVBPQ8N300 66 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 RETNLBQ9BQ08 111 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 S4R3C0 116 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 V9GYS6 101 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 AGRNO00468 2067 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 CUL7Q14999 1698 aa4.26□□□□□ -1.73
SNX13-210ENST00000494402 PLXNB1O43157 2135 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 C7orf66A4D0T2 115 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 GEMIN2O14893 280 aaKnown RBP4.25□□□□□ -1.73
SNX13-210ENST00000494402 MPC2O95563 127 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 IFITM1P13164 125 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
SNX13-210ENST00000494402 SS18Q15532 418 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 LPAL2Q16609 132 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 TTC9CQ8N5M4 171 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 LINC00612Q8N6U2 182 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 PLPP5Q8NEB5 264 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 CLEC2BQ92478 149 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 SCP2D1Q9UJQ7 156 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 LY96Q9Y6Y9 160 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 CABIN1Q9Y6J0 2220 aa4.25□□□□□ -1.73
SNX13-210ENST00000494402 FRMPD1Q5SYB0 1578 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 IGHV3OR16-8A0A075B7F1 116 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 C17orf112F2Z3M2 114 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 M0R2P5 195 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 ZNF737O75373 536 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 HYPMO75409 117 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 PEBP1P30086 187 aaKnown RBP4.24□□□□□ -1.73
SNX13-210ENST00000494402 CIRBPQ14011 172 aaKnown RBP4.24□□□□□ -1.73
SNX13-210ENST00000494402 ESRGQ1W209 222 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 MRGPRG-AS1Q2M3A8 158 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 ASB16-AS1Q495Z4 193 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 Q6P435 159 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 SLC35E3Q7Z769 313 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 Q8N2B8 174 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 SERP1Q9Y6X1 66 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 KIF25-AS1Q9Y6Z4 181 aa4.24□□□□□ -1.73
SNX13-210ENST00000494402 TRPM3Q9HCF6 1732 aaPredicted RBP4.24□□□□□ -1.73
SNX13-210ENST00000494402 ANAPC1Q9H1A4 1944 aa4.23□□□□□ -1.73
SNX13-210ENST00000494402 ZNF736B4DX44 427 aaPredicted RBP4.23□□□□□ -1.73
SNX13-210ENST00000494402 APOC4-APOC2K7ER74 178 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms