RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CACNA1DQ01668 2161 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 LY6DQ14210 128 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 SIPA1L1O43166 1804 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 TRBV20-1A0A075B6N2 111 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 PIP4P2Q8N4L2 257 aa16.32■□□□□ 0.2
RNF40-203ENST00000493683 DOPEY2Q9Y3R5 2298 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 PRIMA1Q86XR5 153 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 NAA38Q9BRA0 125 aaKnown RBP16.31■□□□□ 0.2
RNF40-203ENST00000493683 C5orf63A6NC05 138 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 SLC25A16P16260 332 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 NSUN5P1Q3KNT7 163 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 Q6ZRM9 215 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 MST1LQ2TV78 715 aa16.31■□□□□ 0.2
RNF40-203ENST00000493683 LMO1P25800 156 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 C1orf159Q96HA4 380 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 SDK2Q58EX2 2172 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 PFN1P07737 140 aaKnown RBP16.3■□□□□ 0.2
RNF40-203ENST00000493683 INAFM2P0DMQ5 153 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 LURAP1LQ8IV03 231 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 LCTP09848 1927 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 A8MWP6 167 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 NPC2P61916 151 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 FAM110DQ8TAY7 271 aaPredicted RBP16.3■□□□□ 0.2
RNF40-203ENST00000493683 TMEM14BQ9NUH8 114 aa16.3■□□□□ 0.2
RNF40-203ENST00000493683 KIF26BQ2KJY2 2108 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 IGHV3-73A0A0B4J1V6 119 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 A0A0G2JNJ9 132 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 NDPQ00604 133 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 FAM231DQ6ZW35 169 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 Q9UFV3 132 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 Q8N8P6 123 aa16.29■□□□□ 0.2
RNF40-203ENST00000493683 ADAMTSL5Q6ZMM2 481 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 ARMS2P0C7Q2 107 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 C18orf32Q8TCD1 76 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 TRAV8-3A0A0A6YYJ7 113 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 ETV2O00321 342 aaPredicted RBP16.28■□□□□ 0.2
RNF40-203ENST00000493683 FAM104BQ5XKR9 115 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 IL17RELQ6ZVW7 336 aa16.28■□□□□ 0.2
RNF40-203ENST00000493683 SPTBN1Q01082 2364 aaKnown RBP16.28■□□□□ 0.2
RNF40-203ENST00000493683 GATA3P23771 443 aa16.27■□□□□ 0.2
RNF40-203ENST00000493683 Q8TCH9 128 aa16.27■□□□□ 0.2
RNF40-203ENST00000493683 A0A1W2PPI3 338 aa16.27■□□□□ 0.19
RNF40-203ENST00000493683 FXYD7P58549 80 aa16.27■□□□□ 0.19
RNF40-203ENST00000493683 Q6ZS92 163 aa16.27■□□□□ 0.19
RNF40-203ENST00000493683 RNF144BQ7Z419 303 aa16.27■□□□□ 0.19
RNF40-203ENST00000493683 SPINK8P0C7L1 97 aa16.27■□□□□ 0.19
RNF40-203ENST00000493683 POLR3KQ9Y2Y1 108 aaPredicted RBP16.27■□□□□ 0.19
RNF40-203ENST00000493683 NDUFS6O75380 124 aaKnown RBP16.26■□□□□ 0.19
RNF40-203ENST00000493683 C9JAW5 83 aa16.26■□□□□ 0.19
RNF40-203ENST00000493683 GATA4P43694 442 aa16.26■□□□□ 0.19
RNF40-203ENST00000493683 SMKR1H3BMG3 65 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 NDUFA4L2Q9NRX3 87 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 MMP23AO75900 390 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 FHL1Q13642 323 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 UBE2DNLQ8IWF7 75 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 SPXQ9BT56 116 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 GTSF1LQ9H1H1 148 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 IGKV1-16P04430 117 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 KLHDC3Q9BQ90 382 aa16.25■□□□□ 0.19
RNF40-203ENST00000493683 TMEM14CQ9P0S9 112 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 TET1Q8NFU7 2136 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 GREB1Q4ZG55 1949 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 LINC01356Q8N9X3 169 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 TRAV13-1A0A0B4J241 112 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 OR11H6Q8NGC7 330 aa16.24■□□□□ 0.19
RNF40-203ENST00000493683 UBE2E1P51965 193 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 PMVKQ15126 192 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 TRBV19A0A075B6N1 114 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 H3BMM0 161 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 GAGE2AQ6NT46 116 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 RNF114Q9Y508 228 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 ZNF833PQ6ZTB9 187 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 EDA2RQ9HAV5 297 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 A0A087WWL8 130 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 IGKV1-6A0A0C4DH72 117 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 C2orf66Q6UXQ4 117 aa16.23■□□□□ 0.19
RNF40-203ENST00000493683 ZNF48Q96MX3 618 aaPredicted RBP16.23■□□□□ 0.19
RNF40-203ENST00000493683 C11orf44Q8N8P7 122 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 UBE2WQ96B02 151 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 I3L3M4 83 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 SOCS3O14543 225 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 SAA4P35542 130 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 LYPD2Q6UXB3 125 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 KLHL30-AS1Q8NEE0 82 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 ZNF581Q9P0T4 197 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 TP53TG1Q9Y2A0 90 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 SPTBN2O15020 2390 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 CACNA1GO43497 2377 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 LGALS9BQ3B8N2 356 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 LGALS9CQ6DKI2 356 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 BRD3OSQ6XYD6 125 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 DOCK6Q96HP0 2047 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 FREM3P0C091 2139 aa16.22■□□□□ 0.19
RNF40-203ENST00000493683 C10orf91Q5T1B1 145 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 C9orf118A6NHY6 69 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 INS-IGF2F8WCM5 200 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 IGHV3-53P01767 116 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms