RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 BCL6BQ8N143 479 aaPredicted RBP8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 NUP35Q8NFH5 326 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 SGK494Q96LW2 274 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 A0A096LNT2 108 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 PCP4L1A6NKN8 68 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 H3BUX3 64 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 CA1P00915 261 aaPredicted RBP8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 ESDP10768 282 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 C16orf54Q6UWD8 224 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 PRNTQ86SH4 94 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 NEU1Q99519 415 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 ZNF580Q9UK33 172 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 PSG8Q9UQ74 426 aa8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 SH2D7A6NKC9 451 aaPredicted RBP8.38□□□□□ -1.07
PHACTR4-204ENST00000493669 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 CLEC19AQ6UXS0 136 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 BEX4Q9NWD9 120 aaPredicted RBP8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 FLNCQ14315 2725 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 TRAV8-1A0A0A6YYK1 113 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 LOXL1Q08397 574 aaPredicted RBP8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 NRGNQ92686 78 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 USMG5Q96IX5 58 aa8.37□□□□□ -1.07
PHACTR4-204ENST00000493669 BUB3O43684 328 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 COL8A1P27658 744 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 OR5R1Q8NH85 324 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 SPINK4O60575 86 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 FRMD6-AS1P0C7T7 363 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 RAB4BP61018 213 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 SLC35B1P78383 322 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 JOSD1Q15040 202 aaPredicted RBP8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 MS4A10Q96PG2 267 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 GNB4Q9HAV0 340 aa8.36□□□□□ -1.07
PHACTR4-204ENST00000493669 APCSP02743 223 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 TRGV3P03979 118 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 PAFAH1B2P68402 229 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 CIARTQ8N365 385 aaPredicted RBP8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 METTL26Q96S19 204 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 CLPSL1A2RUU4 121 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 M0R3E3 92 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 PPIFP30405 207 aaKnown RBP8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 C9orf152Q5JTZ5 239 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 SAPCD1Q5SSQ6 148 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 GSN-AS1Q9NRJ2 163 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 U3KQE9 123 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 ZNF462Q96JM2 2506 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 AVPP01185 164 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 HBBP68871 147 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 LY6EQ16553 131 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 ZC2HC1AQ96GY0 325 aa8.35□□□□□ -1.07
PHACTR4-204ENST00000493669 COL12A1Q99715 3063 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 GRIFINA4D1Z8 144 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 CT45A10P0DMU9 189 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 TMEM256Q8N2U0 113 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 TP53TG3Q9ULZ0 132 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 TPPP2P59282 170 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 Q6AWC8 147 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
PHACTR4-204ENST00000493669 A1L4Q6 167 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 CHEK1O14757 476 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 GTSF1Q8WW33 167 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 CLEC5AQ9NY25 188 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.33□□□□□ -1.085e-7■■■■□ 22.9
PHACTR4-204ENST00000493669 IGHV3-35A0A0C4DH35 117 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 ZNF785A8K8V0 405 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 ARL3P36405 182 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 FAM209BQ5JX69 171 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 TCF24Q7RTU0 167 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 NOL4LQ96MY1 436 aaPredicted RBP8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 SPG11Q96JI7 2443 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 A0A0G2JLM5 398 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 NDUFA4O00483 81 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 SERF1AO75920 110 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
PHACTR4-204ENST00000493669 A0A1B0GW15 77 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 IGLV1-40P01703 118 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 GZMBP10144 247 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 SRIP30626 198 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 LINC00310P59036 64 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 C9orf139Q6ZV77 190 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 A0A1B0GUS0 222 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 A8MWP6 167 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 FSHBP01225 129 aa8.32□□□□□ -1.08
PHACTR4-204ENST00000493669 IGHG4P01861 327 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms