RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 A0A1W2PRD5 423 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 A0A1W2PRF3 423 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 A0A1W2PRM7 423 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 NPIPB5A8MRT5 1133 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 C11orf94C9JXX5 98 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 SYS1-DBNDD2H3BUS1 97 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 BMPR1BO00238 502 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 PROP1O75360 226 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 IGLV1-47P01700 117 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 ZFP36P26651 326 aaKnown RBP5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 VDAC2P45880 294 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 TCTAP57738 103 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 KRTAP10-9P60411 292 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 ID3Q02535 119 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 TIGITQ495A1 244 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 TMEM78Q5T7P6 136 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 OR11H6Q8NGC7 330 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 OR4X2Q8NGF9 303 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 DDB2Q92466 427 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 DNAJC30Q96LL9 226 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 SIRPDQ9H106 197 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 LY96Q9Y6Y9 160 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 A0A1W2PRE2 83 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 LINC00473A8K010 186 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 NHLRC4P0CG21 123 aaPredicted RBP5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 SMIM13P0DJ93 91 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 NPPCP23582 126 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 GNB1P62873 340 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 TM4SF20Q53R12 229 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 RPL39P5Q59GN2 51 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 NMSQ5H8A3 153 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 UTF1Q5T230 341 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 OR9G4Q8NGQ1 327 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 GPHA2Q96T91 129 aa5.78□□□□□ -1.48
SMARCE1-211ENST00000493660 FAM90A9PA6NNJ1 464 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 ODF3BA8MYP8 253 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 PAGE4O60829 102 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 IGKV1-39P01597 117 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 IGHV3-7P01780 117 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 IGKV1D-39P04432 117 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 RPL8P62917 257 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 CX3CL1P78423 397 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 ZNF816Q0VGE8 651 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 WFDC2Q14508 124 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 TNXAQ16473 311 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 MMD2Q8IY49 270 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 OSR1Q8TAX0 266 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 INSIG2Q9Y5U4 225 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 A0A096LNT2 108 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 OOSP1A8MZH6 123 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 BUB1B-PAK6H3BSN5 160 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 HMGB3O15347 200 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 APCSP02743 223 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 P0C879 139 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 BRWD1-AS2P59051 145 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 LOXL1Q08397 574 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 RTL8BQ17RB0 113 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 Q6AWC8 147 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 VMO1Q7Z5L0 202 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 SYT8Q8NBV8 401 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 OR10G9Q8NGN4 311 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 DUX5Q96PT3 197 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 RAB40CQ96S21 281 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 LRBAP50851 2863 aa5.77□□□□□ -1.49
SMARCE1-211ENST00000493660 LRRK2Q5S007 2527 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 B4DSR2 109 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 LY6LH3BQJ8 138 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 CHST1O43916 411 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 FCGR3BO75015 233 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 HOXB4P17483 251 aaPredicted RBP5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 XGP55808 180 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 HBG1P69891 147 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 HBG2P69892 147 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 PAX8Q06710 450 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 MINOS1Q5TGZ0 78 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 HCP5Q6MZN7 132 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 RASL11AQ6T310 242 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 C1orf229Q6ZS94 237 aaPredicted RBP5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 PDPNQ86YL7 162 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 RPP25LQ8N5L8 163 aaKnown RBP5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 OR5AN1Q8NGI8 311 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 RAB37Q96AX2 223 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 NABP2Q9BQ15 211 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 SIGLEC9Q9Y336 463 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 MINOS1-NBL1R4GNA1 71 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 DOPEY2Q9Y3R5 2298 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 FAM90A26D6RGX4 464 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 RHODO00212 210 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 CXorf1O96002 111 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 IGKV1-5P01602 117 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 MSMBP08118 114 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 SRD5A1P18405 259 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 COX7A1P24310 79 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 ERVK-16P61578 105 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 FOXI1Q12951 378 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 ETDBQ3ZM63 59 aa5.76□□□□□ -1.49
SMARCE1-211ENST00000493660 CXorf66Q5JRM2 361 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms