RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 TRPM1Q7Z4N2 1603 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 ECM29Q5VYK3 1845 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 A0A0G2JMM0 328 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 SPAARA0A1B0GVQ0 90 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 A0A1W2PPB8 328 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 BBIP1A8MTZ0 92 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 KIR3DP1A8MWS1 328 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 CDC42EP2O14613 210 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 TIMM17BO60830 172 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 TRGC1P0CF51 173 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 AKAIN1P0CW23 69 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 CRYGAP11844 174 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 GNG4P50150 75 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 GNG2P59768 71 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 LSM3P62310 102 aaKnown RBP1.85□□□□□ -2.11
VPS36-205ENST00000492650 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
VPS36-205ENST00000492650 KRTAP25-1Q3LHN0 102 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 PABPC1L2AQ5JQF8 200 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 TEX261Q6UWH6 196 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 IZUMO2Q6UXV1 221 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 Q6ZS52 159 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 LINC00311Q8N616 119 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 PKMYT1Q99640 499 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 SNRNP25Q9BV90 132 aaKnown RBP1.85□□□□□ -2.11
VPS36-205ENST00000492650 COMMD3Q9UBI1 195 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 HHLA3Q9XRX5 114 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 MINOS1-NBL1R4GNA1 71 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 FER1L6Q2WGJ9 1857 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 DLC1Q96QB1 1528 aa1.85□□□□□ -2.11
VPS36-205ENST00000492650 PCM1Q15154 2024 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 RGS12O14924 1447 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 PHLPP1O60346 1717 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 ARHGEF28Q8N1W1 1705 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 SHBGP04278 402 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 ZNF705BP0CI00 300 aaPredicted RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 DEFA4P12838 97 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 HIST1H1BP16401 226 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 SNRPD3P62318 126 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 BTG2P78543 158 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 EIF4EBP1Q13541 118 aaPredicted RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 CDK5R1Q15078 307 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 MEIG1Q5JSS6 88 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 TMEM136Q6ZRR5 245 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 SLC35E3Q7Z769 313 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 C8orf59Q8N0T1 100 aaPredicted RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 ACBD7Q8N6N7 88 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 CHCHD1Q96BP2 118 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 RETNLBQ9BQ08 111 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 DUSP21Q9H596 190 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 DNAJC15Q9Y5T4 150 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 MPC1Q9Y5U8 109 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 ZNF638Q14966 1978 aaKnown RBP1.84□□□□□ -2.11
VPS36-205ENST00000492650 EML6Q6ZMW3 1958 aa1.84□□□□□ -2.11
VPS36-205ENST00000492650 KDM5CP41229 1560 aa1.84□□□□□ -2.12
VPS36-205ENST00000492650 FRMPD1Q5SYB0 1578 aa1.84□□□□□ -2.12
VPS36-205ENST00000492650 NUP210LQ5VU65 1888 aa1.84□□□□□ -2.12
VPS36-205ENST00000492650 HIVEP2P31629 2446 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 KIAA1107Q9UPP5 1409 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 TRPM3Q9HCF6 1732 aaPredicted RBP1.83□□□□□ -2.12
VPS36-205ENST00000492650 IGHV1-18A0A0C4DH31 117 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 PVALEFA0A1B0GWK0 134 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 IFITM5A6NNB3 132 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 OR1I1O60431 355 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 CPSF4O95639 269 aaKnown RBP1.83□□□□□ -2.12
VPS36-205ENST00000492650 IFNA17P01571 189 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 PYYP10082 97 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 CCL4P13236 92 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 FABP4P15090 132 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 ZNF93P35789 620 aaPredicted RBP1.83□□□□□ -2.12
VPS36-205ENST00000492650 Q6ZQT0 140 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 AAED1Q7RTV5 226 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 ATOH7Q8N100 152 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 CCL4L1Q8NHW4 92 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 CIB3Q96Q77 187 aaPredicted RBP1.83□□□□□ -2.12
VPS36-205ENST00000492650 SLC35B3Q9H1N7 401 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 RERGLQ9H628 205 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 OBSL1O75147 1896 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 ANKRD31Q8N7Z5 1873 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 POLEQ07864 2286 aa1.83□□□□□ -2.12
VPS36-205ENST00000492650 COL1A1P02452 1464 aaPredicted RBP1.82□□□□□ -2.12
VPS36-205ENST00000492650 CDK5RAP2Q96SN8 1893 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 MYH7BA7E2Y1 1941 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 TRBV20-1A0A075B6N2 111 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 IGHV3-64A0A075B6Q5 118 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 TRAV40A0A0B4J280 105 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 A0A1B0GVG6 124 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 TMEM218A2RU14 115 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 CCDC179H3BU77 68 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 RPL36A-HNRNPH2H7BZ11 118 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 M0R143 59 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 LYRM1O43325 122 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 PSCAO43653 123 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 SYNGR2O43760 224 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 ZNF737O75373 536 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 SNAPC5O75971 98 aa1.82□□□□□ -2.12
VPS36-205ENST00000492650 CTSDP07339 412 aaPredicted RBP1.82□□□□□ -2.12
VPS36-205ENST00000492650 SAA1P0DJI8 122 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms