RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 SPOCK3Q9BQ16 436 aa16.99■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TGFAP01135 160 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 PDE6HQ13956 83 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 FAM104BQ5XKR9 115 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TMEM158Q8WZ71 300 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 PAX1P15863 534 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CDKN1BP46527 198 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 RHOGP84095 191 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 Q5PR19 223 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 DUX4L9Q6RFH8 374 aaPredicted RBP16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 SRRM4A7MD48 611 aaKnown RBP16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 BUB1B-PAK6H3BSN5 160 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 PLNP26678 52 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CYSLTR1Q9Y271 337 aa16.98■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TMEM213A2RRL7 107 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 THAP8Q8NA92 274 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 NEU4Q8WWR8 484 aaPredicted RBP16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 GTSF1LQ9H1H1 148 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 RNASE4P34096 147 aaKnown RBP16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TRAV21A0A0B4J279 112 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 LYPD2Q6UXB3 125 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ABCA1O95477 2261 aa16.97■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 CIRBPQ14011 172 aaKnown RBP16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 NCOR1O75376 2440 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 LGALS9BQ3B8N2 356 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 LGALS9CQ6DKI2 356 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 ZNF295-AS1Q8N0V1 137 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 SRSF8Q9BRL6 282 aaKnown RBP16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 TRBV19A0A075B6N1 114 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 IGLV1-44P01699 117 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 Q8TCH9 128 aa16.96■□□□□ 0.31
CHKB-CPT1B-203ENST00000492556 K7EP13 123 aa16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 JMJD8Q96S16 334 aa16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 IGHV2-70DA0A0C4DH43 119 aa16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 PRSS46E5RG02 174 aa16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ADAMTSL5Q6ZMM2 481 aa16.95■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 CEACAM4O75871 244 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ADIPOQQ15848 244 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 K7EP34 96 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TMEM14CQ9P0S9 112 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ABHD17AQ96GS6 310 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 LTBP2Q14767 1821 aa16.94■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 DEFB125Q8N687 156 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 GEMIN7Q9H840 131 aaKnown RBP16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 YLPM1P49750 1951 aaKnown RBP16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 DOCK10Q96BY6 2186 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 A8MWV9 139 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 LTAP01374 205 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 LY6EQ16553 131 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 H7C1H1 209 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TNFRSF6BO95407 300 aa16.93■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TMEM262E9PQX1 116 aa16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 SNRPD3P62318 126 aaKnown RBP16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 C5orf64Q2M2E5 130 aa16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TRAV8-2A0A0B4J237 113 aa16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 CD300EQ496F6 205 aaPredicted RBP16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 COPS9Q8WXC6 57 aa16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 IGF2BP2-AS1Q96M15 143 aa16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 SSBP2P81877 361 aaPredicted RBP16.92■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 C8orf49Q96NF6 230 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 LINC01549A6NIU2 74 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 EMP1P54849 157 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 SIGLEC8Q9NYZ4 499 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 SPTAN1Q13813 2472 aaKnown RBP16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 IGKV3-20P01619 116 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 LINC00311Q8N616 119 aa16.91■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 PCNX3Q9H6A9 2034 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 MRPL51Q4U2R6 128 aaKnown RBP16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TMEM155Q4W5P6 130 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 IGFL4Q6B9Z1 124 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ACACAQ13085 2346 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 C15orf32Q32M92 178 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 P0C879 139 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 C3orf36Q3SXR2 165 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ZNF562Q6V9R5 426 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 TEX29Q8N6K0 151 aa16.9■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 C2orf16Q68DN1 1984 aa16.89■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 FRMD6-AS1P0C7T7 363 aa16.89■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 RNASE8Q8TDE3 154 aaKnown RBP16.89■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ZC2HC1AQ96GY0 325 aa16.89■□□□□ 0.3
CHKB-CPT1B-203ENST00000492556 ZNF747Q9BV97 191 aa16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 CEACAM8P31997 349 aaPredicted RBP16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 DLX4Q92988 240 aaPredicted RBP16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 IGHV3OR16-10A0A075B7F0 116 aa16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 CNTFRP26992 372 aa16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 TEX36Q5VZQ5 186 aa16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 DYNLRB2Q8TF09 96 aa16.89■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 CHD3Q12873 2000 aaKnown RBP16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 ZNF672Q499Z4 452 aaPredicted RBP16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 TPSG1Q9NRR2 321 aa16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 GOLGB1Q14789 3259 aaKnown RBP16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 TRAV40A0A0B4J280 105 aa16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 TMEM131Q92545 1883 aa16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 OVOL1O14753 267 aa16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 SIGLEC15Q6ZMC9 328 aa16.88■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 PRSS57Q6UWY2 283 aa16.87■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 DDB2Q92466 427 aa16.87■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 ANAPC13Q9BS18 74 aa16.87■□□□□ 0.29
CHKB-CPT1B-203ENST00000492556 KMT2EQ8IZD2 1858 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms