RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 MALSU1Q96EH3 234 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 ZC2HC1AQ96GY0 325 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 HYLS1Q96M11 299 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 GGACTQ9BVM4 153 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 TNFSF18Q9UNG2 199 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 UHRF1BP1Q6BDS2 1440 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 MYH3P11055 1940 aa0.72□□□□□ -2.29
SEMA3A-207ENST00000490883 TRAV5A0A0B4J249 113 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 H3BRM9 83 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 MFSD11O43934 449 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 IFNA14P01570 189 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 APOA2P02652 100 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 GNG3P63215 75 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 POU6F1Q14863 301 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 SNCBQ16143 134 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 HAGHLQ6PII5 290 aaPredicted RBP0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 PBDC1Q9BVG4 233 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 OR52A1Q9UKL2 312 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 MYLKQ15746 1914 aa0.71□□□□□ -2.3
SEMA3A-207ENST00000490883 A0A1W2PPM0 123 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 C1orf140Q5VVS0 124 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 TMEM14EPQ6UXP3 125 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 PHF5AQ7RTV0 110 aaKnown RBP0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 ARPINQ7Z6K5 226 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 OR5AS1Q8N127 324 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 OR10AG1Q8NH19 301 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 ZNF714Q96N38 554 aa0.7□□□□□ -2.3
SEMA3A-207ENST00000490883 MGAMO43451 1857 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 OR2T8A6NH00 312 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 KLRD1Q13241 179 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 MSMO1Q15800 293 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 SMIM20Q8N5G0 67 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 PRRT1Q99946 306 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 RTL8AQ9BWD3 113 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 TMEM138Q9NPI0 162 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 UFC1Q9Y3C8 167 aa0.69□□□□□ -2.3
SEMA3A-207ENST00000490883 ODAMA1E959 279 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 TMEM238C9JI98 176 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 RER1O15258 196 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 HIST1H2BKO60814 126 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 PIAS1O75925 651 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 IFNA4P05014 189 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 CSN2P05814 226 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 HIST1H2BJP06899 126 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 TAS2R41P59536 307 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 PLEKHB2Q96CS7 222 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 BOLA2Q9H3K6 86 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 RNF11Q9Y3C5 154 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 ZGRF1Q86YA3 2104 aa0.68□□□□□ -2.3
SEMA3A-207ENST00000490883 TRPM1Q7Z4N2 1603 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 FANCMQ8IYD8 2048 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 COL24A1Q17RW2 1714 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 hDV103S1A0JD37 113 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 K7ERJ3 54 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 PPP1R2P41236 205 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 HBBP68871 147 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 IFT20Q8IY31 132 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 PSMF1Q92530 271 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 CARD19Q96LW7 228 aa0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 PHRF1Q9P1Y6 1649 aaKnown RBP0.67□□□□□ -2.3
SEMA3A-207ENST00000490883 N4BP2Q86UW6 1770 aaPredicted RBP0.66□□□□□ -2.3
SEMA3A-207ENST00000490883 LTC4SQ16873 150 aa0.66□□□□□ -2.3
SEMA3A-207ENST00000490883 RTL8BQ17RB0 113 aa0.66□□□□□ -2.3
SEMA3A-207ENST00000490883 LRRC18Q8N456 261 aa0.66□□□□□ -2.3
SEMA3A-207ENST00000490883 MAP1LC3BQ9GZQ8 125 aa0.66□□□□□ -2.3
SEMA3A-207ENST00000490883 CD109Q6YHK3 1445 aa0.65□□□□□ -2.3
SEMA3A-207ENST00000490883 NISCHQ9Y2I1 1504 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 MUC4Q99102 2169 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 IGLV3-1P01715 115 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 GLRXP35754 106 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 CRYBA4P53673 196 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 TCTAP57738 103 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 EIF3IQ13347 325 aaKnown RBP0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 FKBP1CQ5VVH2 108 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 GLIPR1L1Q6UWM5 242 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 LINC00575Q6W349 94 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 STX19Q8N4C7 294 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 HOPXQ9BPY8 73 aaPredicted RBP0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 SPTBP11277 2137 aa0.65□□□□□ -2.31
SEMA3A-207ENST00000490883 JMJD7-PLA2G4BH0Y9G9 81 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 GPR31O00270 319 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 LYRM1O43325 122 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 IDO1P14902 403 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 VBP1P61758 197 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 FAM216BQ8N7L0 139 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 OR2H1Q9GZK4 316 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 WFDC10AQ9H1F0 79 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 GID8Q9NWU2 228 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 LAMTOR3Q9UHA4 124 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 NCAPD3P42695 1498 aa0.64□□□□□ -2.31
SEMA3A-207ENST00000490883 FRMPD1Q5SYB0 1578 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 ZNF462Q96JM2 2506 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 CAMSAP2Q08AD1 1489 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 C5orf67F2Z3F1 127 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 CST7O76096 145 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 PPYP01298 95 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 IGHV3-33P01772 117 aa0.63□□□□□ -2.31
SEMA3A-207ENST00000490883 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms