RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 GAGE12GP0CL81 117 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 OR51S1Q8NGJ8 323 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 SMIM4Q8WVI0 70 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 PRR13Q9NZ81 148 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 HIGD1AQ9Y241 93 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 FAT1Q14517 4588 aa13.53□□□□□ -0.24
UPK3B-205ENST00000490360 FAM229AH3BQW9 127 aa13.52□□□□□ -0.25
UPK3B-205ENST00000490360 SLC25A6P12236 298 aa13.52□□□□□ -0.25
UPK3B-205ENST00000490360 GATA2P23769 480 aaPredicted RBP13.52□□□□□ -0.25
UPK3B-205ENST00000490360 AKR1C1Q04828 323 aa13.52□□□□□ -0.25
UPK3B-205ENST00000490360 CLVS1Q8IUQ0 354 aaPredicted RBP13.52□□□□□ -0.25
UPK3B-205ENST00000490360 VPS13BQ7Z7G8 4022 aa13.52□□□□□ -0.25
UPK3B-205ENST00000490360 PRSS46E5RG02 174 aa13.51□□□□□ -0.25
UPK3B-205ENST00000490360 HYPMO75409 117 aa13.51□□□□□ -0.25
UPK3B-205ENST00000490360 IAPPP10997 89 aa13.51□□□□□ -0.25
UPK3B-205ENST00000490360 ICAM4Q14773 271 aa13.51□□□□□ -0.25
UPK3B-205ENST00000490360 RPUSD4Q96CM3 377 aaKnown RBP13.51□□□□□ -0.25
UPK3B-205ENST00000490360 RABL2AQ9UBK7 228 aaPredicted RBP13.51□□□□□ -0.25
UPK3B-205ENST00000490360 RABL2BQ9UNT1 228 aa13.51□□□□□ -0.25
UPK3B-205ENST00000490360 A0A096LPF7 62 aa13.5□□□□□ -0.25
UPK3B-205ENST00000490360 CXCL2P19875 107 aa13.5□□□□□ -0.25
UPK3B-205ENST00000490360 DAZ2Q13117 558 aaKnown RBP13.5□□□□□ -0.25
UPK3B-205ENST00000490360 TMEM182Q6ZP80 229 aaPredicted RBP13.5□□□□□ -0.25
UPK3B-205ENST00000490360 IL5P05113 134 aa13.49□□□□□ -0.25
UPK3B-205ENST00000490360 PLP1P60201 277 aa13.49□□□□□ -0.25
UPK3B-205ENST00000490360 SELENOTP62341 195 aa13.49□□□□□ -0.25
UPK3B-205ENST00000490360 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
UPK3B-205ENST00000490360 CTDSPLO15194 276 aa13.48□□□□□ -0.25
UPK3B-205ENST00000490360 CYP2G1PQ6ZSU1 146 aa13.48□□□□□ -0.25
UPK3B-205ENST00000490360 ACOT7LQ6ZUV0 252 aa13.48□□□□□ -0.25
UPK3B-205ENST00000490360 TMPRSS5Q9H3S3 457 aa13.48□□□□□ -0.25
UPK3B-205ENST00000490360 K7EP13 123 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 RGS5O15539 181 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 SYNGR2O43760 224 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 OR5G3P0C626 314 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 KRTAP10-1P60331 282 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 LCN15Q6UWW0 184 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 VSIG2Q96IQ7 327 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 PYGO2Q9BRQ0 406 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
UPK3B-205ENST00000490360 A0A087WTM6 91 aa13.46□□□□□ -0.25
UPK3B-205ENST00000490360 J3QL48 77 aa13.46□□□□□ -0.25
UPK3B-205ENST00000490360 GFI1BQ5VTD9 330 aa13.46□□□□□ -0.25
UPK3B-205ENST00000490360 Q6ZSN1 163 aa13.46□□□□□ -0.25
UPK3B-205ENST00000490360 CCDC190Q86UF4 302 aa13.46□□□□□ -0.25
UPK3B-205ENST00000490360 STRAPQ9Y3F4 350 aaKnown RBP13.46□□□□□ -0.25
UPK3B-205ENST00000490360 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 ANKRD20A5PA0PJZ0 165 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 WRBO00258 174 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 NXPH4O95158 308 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 LINC00869P0C866 280 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 ANXA7P20073 488 aaKnown RBP13.45□□□□□ -0.26
UPK3B-205ENST00000490360 GCSHP23434 173 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 FUSP35637 526 aaKnown RBP eCLIP13.45□□□□□ -0.26
UPK3B-205ENST00000490360 C4orf46Q504U0 113 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 SPANXN5Q5MJ07 72 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 TMED4Q7Z7H5 227 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
UPK3B-205ENST00000490360 ZNF331Q9NQX6 463 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-205ENST00000490360 PMS2P5A8MQ11 134 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 SMR3BP02814 79 aaPredicted RBP13.44□□□□□ -0.26
UPK3B-205ENST00000490360 CTF1Q16619 201 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 TMEM128Q5BJH2 165 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 PXDC1Q5TGL8 231 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 Q6ZTI0 123 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 MCUBQ9NWR8 336 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 ICOSQ9Y6W8 199 aa13.44□□□□□ -0.26
UPK3B-205ENST00000490360 SMCO3A2RU48 225 aa13.43□□□□□ -0.26
UPK3B-205ENST00000490360 ZNF680Q8NEM1 530 aa13.43□□□□□ -0.26
UPK3B-205ENST00000490360 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
UPK3B-205ENST00000490360 LEPP41159 167 aa13.42□□□□□ -0.26
UPK3B-205ENST00000490360 SLAQ13239 276 aa13.42□□□□□ -0.26
UPK3B-205ENST00000490360 IL18Q14116 193 aa13.42□□□□□ -0.26
UPK3B-205ENST00000490360 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
UPK3B-205ENST00000490360 MRPS12O15235 138 aaKnown RBP13.41□□□□□ -0.26
UPK3B-205ENST00000490360 ZNF324O75467 553 aaPredicted RBP13.41□□□□□ -0.26
UPK3B-205ENST00000490360 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
UPK3B-205ENST00000490360 TMEM70Q9BUB7 260 aa13.41□□□□□ -0.26
UPK3B-205ENST00000490360 ARL6Q9H0F7 186 aa13.41□□□□□ -0.26
UPK3B-205ENST00000490360 PXMP4Q9Y6I8 212 aa13.41□□□□□ -0.26
UPK3B-205ENST00000490360 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 K7EPK0 472 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 PAX4O43316 350 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 DNAH10OSP0CZ25 163 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 DIRAS2Q96HU8 199 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 ARV1Q9H2C2 271 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 FUT9Q9Y231 359 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
UPK3B-205ENST00000490360 FNDC10F2Z333 226 aa13.39□□□□□ -0.27
UPK3B-205ENST00000490360 CTDSP2O14595 271 aa13.39□□□□□ -0.27
UPK3B-205ENST00000490360 ZNF431Q8TF32 576 aaPredicted RBP13.39□□□□□ -0.27
UPK3B-205ENST00000490360 NPVFQ9HCQ7 196 aa13.39□□□□□ -0.27
UPK3B-205ENST00000490360 MSRB1Q9NZV6 116 aa13.39□□□□□ -0.27
UPK3B-205ENST00000490360 RSL24D1Q9UHA3 163 aaKnown RBP13.39□□□□□ -0.27
UPK3B-205ENST00000490360 TNFRSF18Q9Y5U5 241 aa13.39□□□□□ -0.27
UPK3B-205ENST00000490360 H3BP45 60 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms