RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KCNIP3Q9Y2W7 256 aa10.97□□□□□ -0.65
USP48-210ENST00000489108 A0A0B4J2A0 478 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 RPL7P18124 248 aaKnown RBP10.96□□□□□ -0.65
USP48-210ENST00000489108 NCS1P62166 190 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 LRRC20Q8TCA0 184 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 SHANK2-AS3Q9BTD1 123 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 SHPKQ9UHJ6 478 aa10.96□□□□□ -0.65
USP48-210ENST00000489108 DISC1C4P0D8 188 aa10.95□□□□□ -0.66
USP48-210ENST00000489108 AKR1C4P17516 323 aa10.95□□□□□ -0.66
USP48-210ENST00000489108 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
USP48-210ENST00000489108 TRGV2A0A075B6R0 118 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 A0A087X0K7 114 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 PRSS46E5RG02 174 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 J3KRW8 73 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 VBP1P61758 197 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 MZT2AQ6P582 158 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 CCDC190Q86UF4 302 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 SYT8Q8NBV8 401 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 FAM30AQ9NZY2 134 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 HIGD1AQ9Y241 93 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 DNAH8Q96JB1 4490 aa10.94□□□□□ -0.66
USP48-210ENST00000489108 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
USP48-210ENST00000489108 PAX4O43316 350 aa10.93□□□□□ -0.66
USP48-210ENST00000489108 PITX3O75364 302 aa10.93□□□□□ -0.66
USP48-210ENST00000489108 RAP2BP61225 183 aa10.93□□□□□ -0.66
USP48-210ENST00000489108 ICOSQ9Y6W8 199 aa10.93□□□□□ -0.66
USP48-210ENST00000489108 TRAV12-3A0A0B4J271 114 aa10.92□□□□□ -0.66
USP48-210ENST00000489108 HYPMO75409 117 aa10.92□□□□□ -0.66
USP48-210ENST00000489108 ZNF324O75467 553 aaPredicted RBP10.92□□□□□ -0.66
USP48-210ENST00000489108 AKR1C1Q04828 323 aa10.92□□□□□ -0.66
USP48-210ENST00000489108 GSN-AS1Q9NRJ2 163 aa10.92□□□□□ -0.66
USP48-210ENST00000489108 LY96Q9Y6Y9 160 aa10.92□□□□□ -0.66
USP48-210ENST00000489108 PMS2P5A8MQ11 134 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 PRAC2D3DTV9 90 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 NPIPB6E9PJ23 425 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 PLA2G1BP04054 148 aaKnown RBP10.91□□□□□ -0.66
USP48-210ENST00000489108 IL5P05113 134 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 SNRPCP09234 159 aaKnown RBP10.91□□□□□ -0.66
USP48-210ENST00000489108 OR5G3P0C626 314 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 CYP2G1PQ6ZSU1 146 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 OR51S1Q8NGJ8 323 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 C15orf40Q8WUR7 153 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 FUT9Q9Y231 359 aa10.91□□□□□ -0.66
USP48-210ENST00000489108 LRP1Q07954 4544 aaKnown RBP10.9□□□□□ -0.66
USP48-210ENST00000489108 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
USP48-210ENST00000489108 MRPS12O15235 138 aaKnown RBP10.9□□□□□ -0.66
USP48-210ENST00000489108 ANXA7P20073 488 aaKnown RBP10.9□□□□□ -0.66
USP48-210ENST00000489108 SSBP1Q04837 148 aaKnown RBP10.9□□□□□ -0.66
USP48-210ENST00000489108 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
USP48-210ENST00000489108 PYGO2Q9BRQ0 406 aa10.9□□□□□ -0.66
USP48-210ENST00000489108 LINC00467Q9BRT7 94 aa10.9□□□□□ -0.66
USP48-210ENST00000489108 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.66
USP48-210ENST00000489108 WRBO00258 174 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 IGHV3-53P01767 116 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 PLP1P60201 277 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 RPP30P78346 268 aaKnown RBP10.89□□□□□ -0.67
USP48-210ENST00000489108 PATE2Q6UY27 113 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 ZNF431Q8TF32 576 aaPredicted RBP10.89□□□□□ -0.67
USP48-210ENST00000489108 PRRT1Q99946 306 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 FUNDC2Q9BWH2 189 aa10.89□□□□□ -0.67
USP48-210ENST00000489108 LINC00854A0A1B0GVQ3 168 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 PRAF2O60831 178 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 MED6O75586 246 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 LINC00869P0C866 280 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 ACOT7LQ6ZUV0 252 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
USP48-210ENST00000489108 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
USP48-210ENST00000489108 CIB3Q96Q77 187 aaPredicted RBP10.88□□□□□ -0.67
USP48-210ENST00000489108 PLA2G2DQ9UNK4 145 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 KLF12Q9Y4X4 402 aa10.88□□□□□ -0.67
USP48-210ENST00000489108 SMCO3A2RU48 225 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 LRCOL1A6NCL2 159 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 SYNGR2O43760 224 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 ANXA3P12429 323 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 EVI2AP22794 236 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 SRPXP78539 464 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 MRPL23Q16540 153 aaKnown RBP10.87□□□□□ -0.67
USP48-210ENST00000489108 LCN15Q6UWW0 184 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 NTN5Q8WTR8 489 aaPredicted RBP10.87□□□□□ -0.67
USP48-210ENST00000489108 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 PRO0255Q9UI72 69 aa10.87□□□□□ -0.67
USP48-210ENST00000489108 H3BP45 60 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 H3BTX0 84 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 K7EP13 123 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 CXCL2P19875 107 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 LEPP41159 167 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 CRYBA4P53673 196 aa10.86□□□□□ -0.67
USP48-210ENST00000489108 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms