RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 TRAV8-2A0A0B4J237 113 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 DUXBA0A1W2PPF3 345 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 H3BRN7 92 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 NXPH4O95158 308 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 AKAIN1P0CW23 69 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 CXCL2P19875 107 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 CXCL3P19876 107 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 HOXA5P20719 270 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 SLAQ13239 276 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 IGFL4Q6B9Z1 124 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 CCDC190Q86UF4 302 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 ZBTB8BQ8NAP8 495 aaPredicted RBP4.46□□□□□ -1.7
PTCH1-211ENST00000488809 RPUSD4Q96CM3 377 aaKnown RBP4.46□□□□□ -1.7
PTCH1-211ENST00000488809 PYGO2Q9BRQ0 406 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 SLC50A1Q9BRV3 221 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 TMEM70Q9BUB7 260 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 TMPRSS5Q9H3S3 457 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 MDFICQ9P1T7 246 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 SCP2D1Q9UJQ7 156 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 GPR132Q9UNW8 380 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 HIGD1AQ9Y241 93 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 ICOSQ9Y6W8 199 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 LY96Q9Y6Y9 160 aa4.46□□□□□ -1.7
PTCH1-211ENST00000488809 NPIPB6E9PJ23 425 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 HYPMO75409 117 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 PLA2G1BP04054 148 aaKnown RBP4.45□□□□□ -1.7
PTCH1-211ENST00000488809 IL5P05113 134 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 OR5G3P0C626 314 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 IAPPP10997 89 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
PTCH1-211ENST00000488809 EVI2AP22794 236 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTCH1-211ENST00000488809 KRTAP10-1P60331 282 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 SELENOTP62341 195 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 DAZ2Q13117 558 aaKnown RBP4.45□□□□□ -1.7
PTCH1-211ENST00000488809 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 LCN15Q6UWW0 184 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 LYZL2Q7Z4W2 148 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 TMED4Q7Z7H5 227 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 ZNF680Q8NEM1 530 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 OR51S1Q8NGJ8 323 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 NTN5Q8WTR8 489 aaPredicted RBP4.45□□□□□ -1.7
PTCH1-211ENST00000488809 YIPF6Q96EC8 236 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
PTCH1-211ENST00000488809 A0A087WXM4 84 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 SMCO3A2RU48 225 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 PAX4O43316 350 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 PSCAO43653 123 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 LINC00869P0C866 280 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 DNAH10OSP0CZ25 163 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 GATA2P23769 480 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-211ENST00000488809 LEPP41159 167 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 NCS1P62166 190 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 MRPL23Q16540 153 aaKnown RBP4.44□□□□□ -1.7
PTCH1-211ENST00000488809 GFI1BQ5VTD9 330 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 CYP2G1PQ6ZSU1 146 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 CLVS1Q8IUQ0 354 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-211ENST00000488809 C10orf126Q8N4M7 172 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 VSIG2Q96IQ7 327 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 ODF3Q96PU9 254 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 LINC00467Q9BRT7 94 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 RABL2AQ9UBK7 228 aaPredicted RBP4.44□□□□□ -1.7
PTCH1-211ENST00000488809 RABL2BQ9UNT1 228 aa4.44□□□□□ -1.7
PTCH1-211ENST00000488809 TRGV1A0A0A0MS02 117 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 KRTAP29-1A8MX34 341 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-211ENST00000488809 WRBO00258 174 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 RGS5O15539 181 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 SYNGR2O43760 224 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 ZNF324O75467 553 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-211ENST00000488809 SLC25A6P12236 298 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PLP1P60201 277 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 VBP1P61758 197 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 SPANXN5Q5MJ07 72 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PXDC1Q5TGL8 231 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 Q6ZTI0 123 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 ACOT7LQ6ZUV0 252 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 NEGR1Q7Z3B1 354 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 BPIFA4PQ86YQ2 179 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 DEFB104AQ8WTQ1 72 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 SMIM4Q8WVI0 70 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PCNPQ8WW12 178 aaKnown RBP4.43□□□□□ -1.7
PTCH1-211ENST00000488809 FUNDC2Q9BWH2 189 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 ARL6Q9H0F7 186 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 ZNF331Q9NQX6 463 aaPredicted RBP4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PRR13Q9NZ81 148 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PRO0255Q9UI72 69 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 FUT9Q9Y231 359 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 STRAPQ9Y3F4 350 aaKnown RBP4.43□□□□□ -1.7
PTCH1-211ENST00000488809 PXMP4Q9Y6I8 212 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 UBR4Q5T4S7 5183 aa4.43□□□□□ -1.7
PTCH1-211ENST00000488809 TRAV5A0A0B4J249 113 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 TRAV12-3A0A0B4J271 114 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 PMS2P5A8MQ11 134 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 PRSS46E5RG02 174 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 J3KRW8 73 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 PITX3O75364 302 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 C1QBP02746 253 aa4.42□□□□□ -1.7
PTCH1-211ENST00000488809 SLC25A5P05141 298 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms