RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SCGB2A1O75556 95 aa20.5■□□□□ 0.87
HLA-C-208ENST00000487245 UBE2E1P51965 193 aa20.5■□□□□ 0.87
HLA-C-208ENST00000487245 IGFBPL1Q8WX77 278 aa20.5■□□□□ 0.87
HLA-C-208ENST00000487245 NDUFS7O75251 213 aa20.49■□□□□ 0.87
HLA-C-208ENST00000487245 TOX4O94842 621 aa20.49■□□□□ 0.87
HLA-C-208ENST00000487245 IL4P05112 153 aa20.49■□□□□ 0.87
HLA-C-208ENST00000487245 FAM106CPP0CH98 169 aa20.49■□□□□ 0.87
HLA-C-208ENST00000487245 ZNF414Q96IQ9 312 aa20.49■□□□□ 0.87
HLA-C-208ENST00000487245 PDE6HQ13956 83 aa20.48■□□□□ 0.87
HLA-C-208ENST00000487245 FBLN7Q53RD9 439 aa20.48■□□□□ 0.87
HLA-C-208ENST00000487245 KLF17Q5JT82 389 aaPredicted RBP20.48■□□□□ 0.87
HLA-C-208ENST00000487245 FAM120AOSQ5T036 256 aa20.48■□□□□ 0.87
HLA-C-208ENST00000487245 PSG3Q16557 428 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 PSG8Q9UQ74 426 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 TRAV9-2A0A087WT02 112 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 A0A1B0GW15 77 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 CHEK1O14757 476 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 ZC2HC1AQ96GY0 325 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 C21orf62Q9NYP8 219 aa20.47■□□□□ 0.87
HLA-C-208ENST00000487245 CRXO43186 299 aaPredicted RBP20.46■□□□□ 0.87
HLA-C-208ENST00000487245 LCN12Q6JVE5 192 aa20.46■□□□□ 0.87
HLA-C-208ENST00000487245 C17orf77Q96MU5 243 aa20.46■□□□□ 0.87
HLA-C-208ENST00000487245 NDPQ00604 133 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 Q56UQ5 140 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 ARL6IP6Q8N6S5 226 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 TXN2Q99757 166 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 LPAR2Q9HBW0 351 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 SERTM2A0A1B0GWG4 89 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 FCGR2BP31994 310 aaPredicted RBP20.45■□□□□ 0.86
HLA-C-208ENST00000487245 GAGE1Q13065 139 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 TMEM70Q9BUB7 260 aa20.45■□□□□ 0.86
HLA-C-208ENST00000487245 SH2D7A6NKC9 451 aaPredicted RBP20.44■□□□□ 0.86
HLA-C-208ENST00000487245 LMO4P61968 165 aa20.44■□□□□ 0.86
HLA-C-208ENST00000487245 RIGQ13278 110 aa20.44■□□□□ 0.86
HLA-C-208ENST00000487245 COL5A1-AS1Q5SY13 56 aa20.44■□□□□ 0.86
HLA-C-208ENST00000487245 Q6AWC8 147 aa20.44■□□□□ 0.86
HLA-C-208ENST00000487245 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.43■□□□□ 0.86
HLA-C-208ENST00000487245 A0A1B0GUT8 65 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 OR5AL1P0C617 328 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 ZNF25P17030 456 aaPredicted RBP20.43■□□□□ 0.86
HLA-C-208ENST00000487245 Q8N9W7 124 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 IGHV7-81A0A0B4J1V7 117 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 S100A7P31151 101 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 HNRNPA3P51991 378 aaKnown RBP20.43■□□□□ 0.86
HLA-C-208ENST00000487245 Q6ZN92 141 aa20.43■□□□□ 0.86
HLA-C-208ENST00000487245 MRPS16Q9Y3D3 137 aaKnown RBP20.43■□□□□ 0.86
HLA-C-208ENST00000487245 IGHV1-24A0A0C4DH33 117 aa20.42■□□□□ 0.86
HLA-C-208ENST00000487245 F8W735 103 aaPredicted RBP20.42■□□□□ 0.86
HLA-C-208ENST00000487245 LINC00614P0C842 121 aa20.42■□□□□ 0.86
HLA-C-208ENST00000487245 GNLYP22749 145 aa20.42■□□□□ 0.86
HLA-C-208ENST00000487245 Q71RC1 249 aaPredicted RBP20.42■□□□□ 0.86
HLA-C-208ENST00000487245 NDUFB8O95169 186 aa20.41■□□□□ 0.86
HLA-C-208ENST00000487245 EGR2P11161 476 aaPredicted RBP20.41■□□□□ 0.86
HLA-C-208ENST00000487245 ZNF124Q15973 351 aa20.41■□□□□ 0.86
HLA-C-208ENST00000487245 DLEU1O43261 78 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 G0S2P27469 103 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 COX8CQ7Z4L0 72 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 TMEM208Q9BTX3 173 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 BPESC1Q9GZL8 116 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 AAMDCQ9H7C9 122 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 S4R3C0 116 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 ATRXP46100 2492 aa20.4■□□□□ 0.86
HLA-C-208ENST00000487245 UQCRFS1P47985 274 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 CRIP1P50238 77 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 PSG9Q00887 426 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 KLK9Q2XQG4 91 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 ATOH7Q8N100 152 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 CLEC5AQ9NY25 188 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 KLK9Q9UKQ9 250 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 LAMTOR2Q9Y2Q5 125 aa20.39■□□□□ 0.86
HLA-C-208ENST00000487245 COL6A6A6NMZ7 2263 aa20.39■□□□□ 0.85
HLA-C-208ENST00000487245 NBASA2RRP1 2371 aa20.39■□□□□ 0.85
HLA-C-208ENST00000487245 FBLL1A6NHQ2 334 aaKnown RBP20.39■□□□□ 0.85
HLA-C-208ENST00000487245 SPATA12Q7Z6I5 190 aa20.39■□□□□ 0.85
HLA-C-208ENST00000487245 FAM110DQ8TAY7 271 aaPredicted RBP20.39■□□□□ 0.85
HLA-C-208ENST00000487245 AJUBAQ96IF1 538 aa20.39■□□□□ 0.85
HLA-C-208ENST00000487245 CACNA1AO00555 2505 aa20.38■□□□□ 0.85
HLA-C-208ENST00000487245 C19orf84I3L1E1 186 aa20.38■□□□□ 0.85
HLA-C-208ENST00000487245 TSPOP30536 169 aa20.38■□□□□ 0.85
HLA-C-208ENST00000487245 NCOR2Q9Y618 2525 aa20.38■□□□□ 0.85
HLA-C-208ENST00000487245 ABCA1O95477 2261 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 SYS1-DBNDD2H3BUS1 97 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 LEPROTL1O95214 131 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 MAJINQ3KP22 176 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 ARMS2P0C7Q2 107 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 RPL7P18124 248 aaKnown RBP20.37■□□□□ 0.85
HLA-C-208ENST00000487245 SAA4P35542 130 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 BATFQ16520 125 aa20.37■□□□□ 0.85
HLA-C-208ENST00000487245 M0QZ24 198 aa20.36■□□□□ 0.85
HLA-C-208ENST00000487245 GOSR1O95249 250 aa20.36■□□□□ 0.85
HLA-C-208ENST00000487245 IGLL1P15814 213 aa20.36■□□□□ 0.85
HLA-C-208ENST00000487245 CSN1S1P47710 185 aa20.36■□□□□ 0.85
HLA-C-208ENST00000487245 ZNF493Q6ZR52 646 aa20.36■□□□□ 0.85
HLA-C-208ENST00000487245 CT45A10P0DMU9 189 aa20.35■□□□□ 0.85
HLA-C-208ENST00000487245 PRR31Q5SQ13 230 aa20.35■□□□□ 0.85
HLA-C-208ENST00000487245 M0R3E3 92 aa20.35■□□□□ 0.85
HLA-C-208ENST00000487245 NPFFO15130 113 aa20.35■□□□□ 0.85
HLA-C-208ENST00000487245 CTSGP08311 255 aa20.35■□□□□ 0.85
HLA-C-208ENST00000487245 BCL6BQ8N143 479 aaPredicted RBP20.35■□□□□ 0.85
HLA-C-208ENST00000487245 RABAC1Q9UI14 185 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms