RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.82□□□□□ -0.68
HDLBP-241ENST00000487169 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 HIST1H2BHQ93079 126 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 HIST1H2BNQ99877 126 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 HIST1H2BMQ99879 126 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 RHPN1-AS1Q9BWJ2 59 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 ERVK11-1P61568 191 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 RUSC1-AS1Q66K80 236 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 ABCA12Q86UK0 2595 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 TRBV24-1A0A075B6N3 115 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 BEND2Q8NDZ0 799 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 CYSLTR1Q9Y271 337 aa10.82□□□□□ -0.68
HDLBP-241ENST00000487169 SPTBN4Q9H254 2564 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 TRGV11A0A075B6L2 103 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 EVI2AP22794 236 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 CFHR2P36980 270 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 PLP1P60201 277 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 Q5PR19 223 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 Q8TCH9 128 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 H3BRM9 83 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 K7EM74 188 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 NDUFA3O95167 84 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 DNAL4O96015 105 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 ANKRD11Q6UB99 2663 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-241ENST00000487169 IGKV3D-20A0A0C4DH25 116 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 HBDP02042 147 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 TDGF1P13385 188 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 TCF15Q12870 199 aa10.81□□□□□ -0.68
HDLBP-241ENST00000487169 CDPF1Q6NVV7 123 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 FASNP49327 2511 aaKnown RBP10.8□□□□□ -0.68
HDLBP-241ENST00000487169 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 GATA3P23771 443 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 LCN12Q6JVE5 192 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-241ENST00000487169 SYNJ2BPP57105 145 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 RNF166Q96A37 237 aaPredicted RBP10.8□□□□□ -0.68
HDLBP-241ENST00000487169 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 APOMO95445 188 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 CACNG7P62955 275 aa10.8□□□□□ -0.68
HDLBP-241ENST00000487169 SRSF1Q07955 248 aaKnown RBP eCLIP10.8□□□□□ -0.68
HDLBP-241ENST00000487169 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 LIME1Q9H400 295 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 PEF1Q9UBV8 284 aaKnown RBP10.79□□□□□ -0.68
HDLBP-241ENST00000487169 ATP6V0E1O15342 81 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 COTL1Q14019 142 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 CHCHD5Q9BSY4 110 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 PLXNA2O75051 1894 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 TRAV12-3A0A0B4J271 114 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 G3V318 75 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 MMP23AO75900 390 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 CXCL1P09341 107 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
HDLBP-241ENST00000487169 PLXNB1O43157 2135 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 IGHV1-69DA0A0B4J2H0 117 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 NDUFS7O75251 213 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 IGHV1-69P01742 117 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 CNTFRP26992 372 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 DAZ1Q9NQZ3 744 aaKnown RBP10.78□□□□□ -0.68
HDLBP-241ENST00000487169 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
HDLBP-241ENST00000487169 CMC4P56277 68 aaPredicted RBP10.78□□□□□ -0.68
HDLBP-241ENST00000487169 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 PRR31Q5SQ13 230 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 ZNF106Q9H2Y7 1883 aaKnown RBP10.78□□□□□ -0.68
HDLBP-241ENST00000487169 NCR2O95944 276 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 HIST3H2BBQ8N257 126 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
HDLBP-241ENST00000487169 OBSL1O75147 1896 aa10.78□□□□□ -0.68
HDLBP-241ENST00000487169 FOXL1Q12952 345 aa10.77□□□□□ -0.68
HDLBP-241ENST00000487169 ATP5L2Q7Z4Y8 100 aa10.77□□□□□ -0.68
HDLBP-241ENST00000487169 LINC00477Q96M19 166 aa10.77□□□□□ -0.68
HDLBP-241ENST00000487169 TMEM14BQ9NUH8 114 aa10.77□□□□□ -0.68
HDLBP-241ENST00000487169 DENND4CQ5VZ89 1909 aa10.77□□□□□ -0.68
HDLBP-241ENST00000487169 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 CR1LQ2VPA4 569 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 LYZL1Q6UWQ5 148 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 IFI27L1Q96BM0 104 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 NCOR1P1Q9H4R4 102 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 J3QKU1 62 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 NDUFB8O95169 186 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 TOMM40O96008 361 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 SMIM13P0DJ93 91 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 NIT1Q86X76 327 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 LYPD1Q8N2G4 141 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 MRPL16Q9NX20 251 aaKnown RBP10.77□□□□□ -0.69
HDLBP-241ENST00000487169 FNDC10F2Z333 226 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 TMEM249Q2WGJ8 235 aa10.77□□□□□ -0.69
HDLBP-241ENST00000487169 A0A087WX48 190 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
HDLBP-241ENST00000487169 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
HDLBP-241ENST00000487169 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 Q96MF0 132 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 IGHV2-70DA0A0C4DH43 119 aa10.76□□□□□ -0.69
HDLBP-241ENST00000487169 LYL1P12980 280 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms