RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 LAMTOR1Q6IAA8 161 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 HCP5Q6MZN7 132 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF833PQ6ZTB9 187 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 LYZL2Q7Z4W2 148 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF695Q8IW36 515 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-216ENST00000487043 OR13D1Q8NGV5 346 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 OR10X1Q8NGY0 326 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 OR51H1Q8NH63 302 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 LSM10Q969L4 123 aaKnown RBP2.7□□□□□ -1.98
PTCD3-216ENST00000487043 OR10C1Q96KK4 312 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 C2orf50Q96LR7 162 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 TCEAL7Q9BRU2 100 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 REG4Q9BYZ8 158 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 NMES1Q9C002 83 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 EDA2RQ9HAV5 297 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 ABCA12Q86UK0 2595 aa2.7□□□□□ -1.98
PTCD3-216ENST00000487043 POLQO75417 2590 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 ARHGAP32A7KAX9 2087 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 A0A1B0GVY2 172 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 ODF3BA8MYP8 253 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 OOSP1A8MZH6 123 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 G3V3Q6 166 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 RNASEK-C17orf49H0YIS7 233 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 PANO1I0J062 215 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 PITX3O75364 302 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 IGKV1-39P01597 117 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 IGKV1D-39P04432 117 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 S100A8P05109 93 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 MSMBP08118 114 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 SLC25A4P12235 298 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 S100PP25815 95 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 PSMB6P28072 239 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 HTR1DP28221 377 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 RAB13P51153 203 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 UBE2E1P51965 193 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 ZNF816Q0VGE8 651 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 DIAPH2-AS1Q14236 149 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 IAH1Q2TAA2 248 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 LGALSLQ3ZCW2 172 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 NMSQ5H8A3 153 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 GCSAMLQ5JQS6 135 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 LINC00336Q6ZUF6 198 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 VMO1Q7Z5L0 202 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 PDZD9Q8IXQ8 264 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 OR4P4Q8NGL7 312 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 OR2T35Q8NGX2 323 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 BAALCQ8WXS3 180 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 GPR146Q96CH1 333 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 MALSU1Q96EH3 234 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 SPIN2AQ99865 258 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 RNF5Q99942 180 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 SPIN2BQ9BPZ2 258 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 NABP2Q9BQ15 211 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 SIRT7Q9NRC8 400 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 COA4Q9NYJ1 87 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 COMMD9Q9P000 198 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 ZNRD1Q9P1U0 126 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 TBL2Q9Y4P3 447 aaKnown RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 AMMECR1Q9Y4X0 333 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 PDZD2O15018 2839 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 NAV2Q8IVL1 2488 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
PTCD3-216ENST00000487043 MAP1AP78559 2803 aaPredicted RBP2.69□□□□□ -1.98
PTCD3-216ENST00000487043 MED13LQ71F56 2210 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 ITPR2Q14571 2701 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 IGLV11-55A0A075B6I3 123 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 TRAV14DV4A0A0A6YYC5 116 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 IGHV3-74A0A0B4J1X5 117 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 IGHV1-3A0A0C4DH29 117 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 CENPVL3A0A0U1RRI6 287 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 A0A1W2PRF3 423 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 A0A1W2PRM7 423 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 A6NDN8 102 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 HMSDA8MTL9 139 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 KLLNB2CW77 178 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 C11orf94C9JXX5 98 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 INS-IGF2F8WCM5 200 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 H0YJW9 148 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 SMLR1H3BR10 107 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 J3QLI3 93 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 SCO1O75880 301 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 S1PR2O95136 353 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 MPC2O95563 127 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 HRASP01112 189 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 KRASP01116 189 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 IGKV1-5P01602 117 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 APOA2P02652 100 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 RLN2P04090 185 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 NQO2P16083 231 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 RAB5AP20339 215 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 G6PCP35575 357 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 LGALS7P47929 136 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 REG1BP48304 166 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 PRB3Q04118 309 aaPredicted RBP2.68□□□□□ -1.98
PTCD3-216ENST00000487043 EBI3Q14213 229 aa2.68□□□□□ -1.98
PTCD3-216ENST00000487043 SMCO1Q147U7 214 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms