RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NIPSNAP3BQ9BS92 247 aa2.77□□□□□ -1.97
SNRNP40-205ENST00000486941 Q9H521 79 aa2.77□□□□□ -1.97
SNRNP40-205ENST00000486941 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.77□□□□□ -1.97
SNRNP40-205ENST00000486941 RFNGQ9Y644 331 aa2.77□□□□□ -1.97
SNRNP40-205ENST00000486941 HLA-DRB4X5D2U9 266 aa2.77□□□□□ -1.97
SNRNP40-205ENST00000486941 IGLV2-18A0A075B6J9 118 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 CDK2AP2O75956 126 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 CDS2O95674 445 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 IL4P05112 153 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 RD3LP0DJH9 198 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 TBPP20226 339 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 OR10J1P30954 320 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 TGFBR1P36897 503 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 ID1P41134 155 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 RND2P52198 227 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 EMP1P54849 157 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 NEDD8Q15843 81 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 USF2Q15853 346 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 TRIM16LQ309B1 348 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 SP6Q3SY56 376 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 RNASE10Q5GAN6 216 aaKnown RBP2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 FAM222AQ5U5X8 452 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 SPATA31B1PQ5VZV4 182 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 MZT2BQ6NZ67 158 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 CFAP161Q6P656 301 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 FOXI2Q6ZQN5 318 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 SNX29P2Q8IUI4 249 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 ARRDC1Q8N5I2 433 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 CCDC71LQ8N9Z2 235 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 TERB2Q8NHR7 220 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 ZFAND1Q8TCF1 268 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 ABHD1Q96SE0 405 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 SAV1Q9H4B6 383 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 COPZ2Q9P299 210 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 COMMD3Q9UBI1 195 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 KLK11Q9UBX7 282 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 CACFD1Q9UGQ2 172 aa2.76□□□□□ -1.97
SNRNP40-205ENST00000486941 IGHV3OR16-12A0A075B7B8 117 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 A0A0G2JRQ6 117 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C16orf90A8MZG2 172 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 HBE1P02100 147 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 CD3DP04234 171 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 ELK1P19419 428 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 ALDH3B2P48448 385 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 PSMB3P49720 205 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 RORCP51449 518 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 PAX9P55771 341 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 ATP5IP56385 69 aaPredicted RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 KRTAP10-1P60331 282 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 DAD1P61803 113 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 LSM3P62310 102 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 PSG9Q00887 426 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNF79Q15937 498 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 RRN3P1Q2M238 152 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C1orf194Q5T5A4 169 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 GDF5OSQ5U4N7 250 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 SAMD13Q5VXD3 122 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 OR8G2PQ6IF36 304 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 SELENOHQ8IZQ5 122 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C1orf158Q8N1D5 194 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 ZNF709Q8N972 641 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C15orf53Q8NAA6 179 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 OR4B1Q8NGF8 309 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 OR51G1Q8NGK1 321 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 RNASE11Q8TAA1 199 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 GLYATL2Q8WU03 294 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C15orf40Q8WUR7 153 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 RBPMSQ93062 196 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 GPR146Q96CH1 333 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 YIPF6Q96EC8 236 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 C7orf50Q9BRJ6 194 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 TMEM222Q9H0R3 208 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 MTFP1Q9UDX5 166 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 GOLT1BQ9Y3E0 138 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 TMED3Q9Y3Q3 217 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 YTHDF2Q9Y5A9 579 aaKnown RBP2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 U3KQ87 197 aa2.75□□□□□ -1.97
SNRNP40-205ENST00000486941 A0A0J9YX75 114 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 NBDYA0A0U1RRE5 68 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 CEBPZOSA8MTT3 80 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 A8MTW9 85 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 SNRPGP15A8MWD9 76 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 ISLRO14498 428 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 BCL2L11O43521 198 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 HPGDSO60760 199 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 TNFAIP8O95379 198 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 ATP6V1G2O95670 118 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 RAB3DO95716 219 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 FABP1P07148 127 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 OR5AC1P0C628 307 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 HTN3P15516 51 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 GPX4P36969 197 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 FXYD7P58549 80 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 TAS2R19P59542 299 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 DEFB1P60022 68 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 B2MP61769 119 aa2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 SUPT4H1P63272 117 aaKnown RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 SSBP1Q04837 148 aaKnown RBP2.74□□□□□ -1.97
SNRNP40-205ENST00000486941 PNRC1Q12796 327 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms