RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZNF837Q96EG3 531 aaPredicted RBP6.25□□□□□ -1.41
COL4A5-205ENST00000483338 ZNF488Q96MN9 340 aa6.25□□□□□ -1.41
COL4A5-205ENST00000483338 GFRA4Q9GZZ7 299 aa6.25□□□□□ -1.41
COL4A5-205ENST00000483338 SPTA1P02549 2419 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 A0A1B0GX51 115 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 C19orf71A6NCJ1 209 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 LINC01549A6NIU2 74 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 IGHG3P01860 377 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 PATE4P0C8F1 98 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 ITLN1Q8WWA0 313 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 EPDR1Q9UM22 224 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 VPS13AQ96RL7 3174 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 CEP192Q8TEP8 1941 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 K7ESF4 209 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 IGHV4-34P06331 123 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 EMP1P54849 157 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 UBE2L3P68036 154 aaKnown RBP6.24□□□□□ -1.41
COL4A5-205ENST00000483338 FAM173AQ9BQD7 235 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 MLST8Q9BVC4 326 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 PRRC2CQ9Y520 2896 aaKnown RBP6.24□□□□□ -1.41
COL4A5-205ENST00000483338 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 ZNF672Q499Z4 452 aaPredicted RBP6.24□□□□□ -1.41
COL4A5-205ENST00000483338 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 HES3Q5TGS1 186 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 ZNF493Q6ZR52 646 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 FAM167A-AS1Q96KT0 104 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 ARRDC1-AS1Q9H2J1 176 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 FSCN3Q9NQT6 498 aa6.24□□□□□ -1.41
COL4A5-205ENST00000483338 ZNF318Q5VUA4 2279 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 LINC00473A8K010 186 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 HLA-DRB4P13762 266 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 SLC25A53Q5H9E4 307 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 PSMG4Q5JS54 123 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 SLC25A2Q9BXI2 301 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 HLA-DRB4X5D2U9 266 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 SHISA9B4DS77 424 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 TM4SF5O14894 197 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 ARMS2P0C7Q2 107 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 C8orf88P0DMB2 117 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 PYYP10082 97 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 UCNP55089 124 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
COL4A5-205ENST00000483338 OR2H1Q9GZK4 316 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 PATE3B3GLJ2 98 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 IGKCP01834 107 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 GATD1Q8NB37 220 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 FAM57AQ8TBR7 257 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 CFHR4Q92496 578 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 MSRB2Q9Y3D2 182 aa6.23□□□□□ -1.41
COL4A5-205ENST00000483338 D6R8Y8 96 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 FOXC1Q12948 553 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 HES1Q14469 280 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 TRGV9Q99603 122 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 CALYQ9NYX4 217 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 NBASA2RRP1 2371 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 SPTY2D1-AS1A0A0U1RR47 76 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 M0R2P5 195 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 DLL1O00548 723 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 OR2H2O95918 312 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 ORM2P19652 201 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 PLXDC1Q8IUK5 500 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 MKXQ8IYA7 352 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 MRAPQ8TCY5 172 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 MYO15AQ9UKN7 3530 aa6.22□□□□□ -1.41
COL4A5-205ENST00000483338 DUTP33316 252 aaKnown RBP6.21□□□□□ -1.41
COL4A5-205ENST00000483338 C4orf26Q17RF5 130 aa6.21□□□□□ -1.41
COL4A5-205ENST00000483338 PROK2Q9HC23 129 aa6.21□□□□□ -1.41
COL4A5-205ENST00000483338 ZNF492Q9P255 531 aa6.21□□□□□ -1.41
COL4A5-205ENST00000483338 TRAV3A0A0B4J244 114 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 A0A1B0GUT8 65 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 MBD3L4A6NDZ8 208 aaPredicted RBP6.21□□□□□ -1.42
COL4A5-205ENST00000483338 MBD3L3A6NE82 208 aaPredicted RBP6.21□□□□□ -1.42
COL4A5-205ENST00000483338 MBD3L5A6NJ08 208 aaPredicted RBP6.21□□□□□ -1.42
COL4A5-205ENST00000483338 DNPH1O43598 174 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 CD7P09564 240 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 CECR9P0C854 216 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 RPS28P62857 69 aaKnown RBP6.21□□□□□ -1.42
COL4A5-205ENST00000483338 EYSQ5T1H1 3165 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 NPYP01303 97 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 FAM27BQ5VT28 67 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 PMS2CLQ68D20 193 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 VKORC1L1Q8N0U8 176 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 Q8N1Y9 231 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 NPIPB3Q92617 1050 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 NBEAQ8NFP9 2946 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 TRIOO75962 3097 aa6.21□□□□□ -1.42
COL4A5-205ENST00000483338 TNFAIP6P98066 277 aaPredicted RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 ZNF497Q6ZNH5 498 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 TMEM219Q86XT9 240 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 C3orf22Q8N5N4 141 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 WDR31Q8NA23 367 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 RBAKDNA6NC62 111 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 SLC25A20O43772 301 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 UBE2D1P51668 147 aa6.2□□□□□ -1.42
COL4A5-205ENST00000483338 CRIP2P52943 208 aaPredicted RBP6.2□□□□□ -1.42
COL4A5-205ENST00000483338 SRSF2Q01130 221 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms