RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 G3V2T6 193 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 COX7CP15954 63 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 RAB5CP51148 216 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 GLIPR1L1Q6UWM5 242 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 ZGRF1Q86YA3 2104 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 HYLS1Q96M11 299 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 ZNF714Q96N38 554 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 MYLKQ15746 1914 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 MUC4Q99102 2169 aa0.63□□□□□ -2.31
CCDC58-204ENST00000479414 ATG12O94817 140 aa0.62□□□□□ -2.31
CCDC58-204ENST00000479414 TRGC2P03986 189 aa0.62□□□□□ -2.31
CCDC58-204ENST00000479414 MRPS15P82914 257 aaKnown RBP0.62□□□□□ -2.31
CCDC58-204ENST00000479414 OR2J1Q9GZK6 312 aa0.62□□□□□ -2.31
CCDC58-204ENST00000479414 H7C1C5 153 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 PPYP01298 95 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 LCN6P62502 163 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 EIF3IQ13347 325 aaKnown RBP0.61□□□□□ -2.31
CCDC58-204ENST00000479414 ARPINQ7Z6K5 226 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 OR5AS1Q8N127 324 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 PSMF1Q92530 271 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 C10orf95Q9H7T3 257 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 CACYBPQ9HB71 228 aaKnown RBP0.61□□□□□ -2.31
CCDC58-204ENST00000479414 KIAA1109Q2LD37 5005 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 GPR98Q8WXG9 6306 aa0.61□□□□□ -2.31
CCDC58-204ENST00000479414 IGLV3-32A0A0A0MS00 114 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 C9orf170A2RU37 121 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 C5orf67F2Z3F1 127 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 IGLV3-1P01715 115 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 PHBP35232 272 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 OR52A1Q9UKL2 312 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 TRANK1O15050 2925 aa0.6□□□□□ -2.31
CCDC58-204ENST00000479414 SETXQ7Z333 2677 aaKnown RBP0.59□□□□□ -2.31
CCDC58-204ENST00000479414 TRAV27A0A087WT01 109 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 RIIAD1A6NNX1 92 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 JMJD7-PLA2G4BH0Y9G9 81 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 MFSD11O43934 449 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 ARF6P62330 175 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 KLRD1Q13241 179 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 PPTC7Q8NI37 304 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 SSR3Q9UNL2 185 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 RNF11Q9Y3C5 154 aa0.59□□□□□ -2.31
CCDC58-204ENST00000479414 MYH3P11055 1940 aa0.59□□□□□ -2.32
CCDC58-204ENST00000479414 TNRC18O15417 2968 aaPredicted RBP0.59□□□□□ -2.32
CCDC58-204ENST00000479414 A0A0C4DFX4 3053 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 SPTBP11277 2137 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 TRAV23DV6A0A075B6W5 121 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 A0A0D9SG42 100 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 AIPO00170 330 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 RER1O15258 196 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 SPATA8Q6RVD6 105 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 LINC00575Q6W349 94 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 SMIM20Q8N5G0 67 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 GINS3Q9BRX5 216 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 SH3BGRL3Q9H299 93 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 LYRM2Q9NU23 88 aaPredicted RBP0.58□□□□□ -2.32
CCDC58-204ENST00000479414 COL6A3P12111 3177 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 PCNTO95613 3336 aa0.58□□□□□ -2.32
CCDC58-204ENST00000479414 KDM6BO15054 1643 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 hDV103S1A0JD37 113 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 CSN2P05814 226 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 CD14P08571 375 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 OGNP20774 298 aaKnown RBP0.57□□□□□ -2.32
CCDC58-204ENST00000479414 SCGB2B2Q4G0G5 96 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 CARD19Q96LW7 228 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 MUC2Q02817 5179 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 FRMPD1Q5SYB0 1578 aa0.57□□□□□ -2.32
CCDC58-204ENST00000479414 RYR1P21817 5038 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 IFNA1P01562 189 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 OR10AG1Q8NH19 301 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 ZNF431Q8TF32 576 aaPredicted RBP0.56□□□□□ -2.32
CCDC58-204ENST00000479414 PRRT1Q99946 306 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 MAST4O15021 2626 aa0.56□□□□□ -2.32
CCDC58-204ENST00000479414 UHRF1BP1Q6BDS2 1440 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 DNHD1Q96M86 4753 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 PRH1P02810 166 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 IDO1P14902 403 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 GNG3P63215 75 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 LRRC18Q8N456 261 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 OR10AC1Q8NH08 325 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 PBDC1Q9BVG4 233 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 TRPM1Q7Z4N2 1603 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 CD109Q6YHK3 1445 aa0.55□□□□□ -2.32
CCDC58-204ENST00000479414 PTPRDP23468 1912 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 SETBP1Q9Y6X0 1596 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 EYSQ5T1H1 3165 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 K7EIL1 84 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 IFNA14P01570 189 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 RPL19P84098 196 aaKnown RBP0.54□□□□□ -2.32
CCDC58-204ENST00000479414 LTC4SQ16873 150 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 SPATA45Q537H7 98 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 C1orf140Q5VVS0 124 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 IFT20Q8IY31 132 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 OR13C6PQ8NH95 151 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 LIMD2Q9BT23 127 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 ZFHX4Q86UP3 3567 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 RYR3Q15413 4870 aa0.54□□□□□ -2.32
CCDC58-204ENST00000479414 TEP1Q99973 2627 aaKnown RBP0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms