RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 MYL5Q02045 173 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 KLRD1Q13241 179 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 TMEM155Q4W5P6 130 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 DPPA3Q6W0C5 159 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 C3orf62Q6ZUJ4 267 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 PKMYT1Q99640 499 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 R4GN34 69 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 WDR90Q96KV7 1748 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 SHANK3Q9BYB0 1731 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 DLC1Q96QB1 1528 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 KDM6AO15550 1401 aaPredicted RBP1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 MYOM3Q5VTT5 1437 aa1.91□□□□□ -2.1
SMARCA1-204ENST00000478420 MYH11P35749 1972 aa1.9□□□□□ -2.1
SMARCA1-204ENST00000478420 MYH7BA7E2Y1 1941 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SDCBPO00560 298 aaPredicted RBP1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 UQCRQO14949 82 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 CPSF4O95639 269 aaKnown RBP1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 FXYD2P54710 66 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 AQP4P55087 323 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SNRPD3P62318 126 aaKnown RBP1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 RELAQ04206 551 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 CDK5R1Q15078 307 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 TMEM91Q6ZNR0 172 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 Q6ZQT0 140 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 Q6ZS52 159 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SLC35E3Q7Z769 313 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 RPS19BP1Q86WX3 136 aaKnown RBP1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 Q8IYB0 196 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 LINC00311Q8N616 119 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 TCTEX1D1Q8N7M0 179 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 OR4B1Q8NGF8 309 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 OR10AC1Q8NH08 325 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 PDCD10Q9BUL8 212 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 TMEM191AQ9H0A3 160 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 DUSP21Q9H596 190 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SCN3BQ9NY72 215 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 COMMD3Q9UBI1 195 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 HHLA3Q9XRX5 114 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 HSPE1-MOB4S4R3N1 261 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SEC16AO15027 2179 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 SCRIBQ14160 1630 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 CUL9Q8IWT3 2517 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 NISCHQ9Y2I1 1504 aa1.9□□□□□ -2.11
SMARCA1-204ENST00000478420 KDM5CP41229 1560 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF638Q14966 1978 aaKnown RBP1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 IGHV1-18A0A0C4DH31 117 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 C20orf202A1L168 122 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 M0R129 80 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF737O75373 536 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 HBDP02042 147 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 APODP05090 189 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 TRGC1P0CF51 173 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 MRPS10P82664 201 aaKnown RBP1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 PLGLB1Q02325 96 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 NNATQ16517 81 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 LCN15Q6UWW0 184 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 AAED1Q7RTV5 226 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 FAM216BQ8N7L0 139 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 PPP3R2Q96LZ3 170 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 MCEEQ96PE7 176 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 RETNLBQ9BQ08 111 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 CST9LQ9H4G1 147 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 SOX21Q9Y651 276 aaPredicted RBP1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 RGS12O14924 1447 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 VPS8Q8N3P4 1428 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 THADAQ6YHU6 1953 aa1.89□□□□□ -2.11
SMARCA1-204ENST00000478420 COL1A1P02452 1464 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 OBSL1O75147 1896 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 LCTP09848 1927 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 TRAV3A0A0B4J244 114 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 A0A0J9YX75 114 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 B4DSR2 109 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 S100A8P05109 93 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 CTSDP07339 412 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 ZNF705BP0CI00 300 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 GUCA1AP43080 201 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 PABPC1L2AQ5JQF8 200 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 OR5D14Q8NGL3 314 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 CCL4L1Q8NHW4 92 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 CHCHD1Q96BP2 118 aaKnown RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 OR4C12Q96R67 309 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 PSMG3Q9BT73 122 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 FKBP11Q9NYL4 201 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 BOKQ9UMX3 212 aaPredicted RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 FOCADQ5VW36 1801 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 EML6Q6ZMW3 1958 aa1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 NYNRINQ9P2P1 1898 aaKnown RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 SCAF11Q99590 1463 aaKnown RBP1.88□□□□□ -2.11
SMARCA1-204ENST00000478420 NUP98P52948 1817 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 POLEQ07864 2286 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 IGKV1D-42A0A075B6H8 117 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 A0A0G2JMM0 328 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 A0A1W2PPB8 328 aa1.87□□□□□ -2.11
SMARCA1-204ENST00000478420 KIR3DP1A8MWS1 328 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms