RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 FANCD2OSQ96PS1 177 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 ASCL2Q99929 193 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 SIRPDQ9H106 197 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 PPP1R14DQ9NXH3 145 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 HILPDAQ9Y5L2 63 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
PTPRD-209ENST00000477552 PLXNB1O43157 2135 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 FABP5P3A8MUU1 101 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 SYS1-DBNDD2H3BUS1 97 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 APOHP02749 345 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-209ENST00000477552 SNRPCP09234 159 aaKnown RBP6.58□□□□□ -1.36
PTPRD-209ENST00000477552 SAMD13Q5VXD3 122 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 C12orf54Q6X4T0 127 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 ORMDL3Q8N138 153 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 PRSS3P2Q8NHM4 247 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 EEF1AKMT3Q96AZ1 226 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 TLN1Q9Y490 2541 aaKnown RBP6.58□□□□□ -1.36
PTPRD-209ENST00000477552 MUC6Q6W4X9 2439 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 PTPRQQ9UMZ3 2332 aa6.58□□□□□ -1.36
PTPRD-209ENST00000477552 A0A1W2PRD5 423 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 A0A1W2PRF3 423 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 A0A1W2PRM7 423 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 OR4C46A6NHA9 309 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 FAM223BA6NKX1 122 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 LYNX1G3V0Z9 82 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 H3BUA1 57 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 NDUFS8O00217 210 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 EREGO14944 169 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 FRMD6-AS1P0C7T7 363 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 LYNX1P0DP58 116 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 CRIP2P52943 208 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-209ENST00000477552 HIST1H1AQ02539 215 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-209ENST00000477552 GDF5OSQ5U4N7 250 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 UNQ6494/PRO21346Q6UXR6 183 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 EXOC3-AS1Q8N2X6 119 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 FAM19A2Q8N3H0 131 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 OR1N2Q8NGR9 330 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 ORAOV1Q8WV07 137 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 ZC2HC1AQ96GY0 325 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 PRR25Q96S07 402 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
PTPRD-209ENST00000477552 U3KQK5 164 aa6.57□□□□□ -1.36
PTPRD-209ENST00000477552 PTPRZ1P23471 2315 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-209ENST00000477552 MUC3AQ02505 3323 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 IGHV7-81A0A0B4J1V7 117 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 VWC2LB2RUY7 222 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 DLEU1O43261 78 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 CTSGP08311 255 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 TSPOP30536 169 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 FAM104BQ5XKR9 115 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 LINC00322Q6ZN03 302 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-209ENST00000477552 Q8N9W7 124 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF502Q8TBZ5 544 aa6.56□□□□□ -1.36
PTPRD-209ENST00000477552 SSBP4Q9BWG4 385 aaPredicted RBP6.56□□□□□ -1.36
PTPRD-209ENST00000477552 MGAQ8IWI9 3026 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 IGHV3-21A0A0B4J1V1 117 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 LINC01549A6NIU2 74 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 APELAP0DMC3 54 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 LINC01545Q5VT33 79 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 EBLN2Q6P2I7 272 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 UNQ5815/PRO19632Q6UWF5 114 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 METTL26Q96S19 204 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 NXT2Q9NPJ8 142 aaKnown RBP6.55□□□□□ -1.36
PTPRD-209ENST00000477552 GOLT1BQ9Y3E0 138 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 CELSR3Q9NYQ7 3312 aa6.55□□□□□ -1.36
PTPRD-209ENST00000477552 TPRP12270 2363 aaKnown RBP6.54□□□□□ -1.36
PTPRD-209ENST00000477552 TRAV8-1A0A0A6YYK1 113 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 K7EMI3 77 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 SH2D1AO60880 128 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF25P17030 456 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-209ENST00000477552 CACNG7P62955 275 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 NHLH1Q02575 133 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF124Q15973 351 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 LGALS9BQ3B8N2 356 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 LDLRAD2Q5SZI1 272 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 LGALS9CQ6DKI2 356 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 LHFPL4Q7Z7J7 247 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 DEFB125Q8N687 156 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF738Q8NE65 137 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 PIFOQ8TCI5 191 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 USMG5Q96IX5 58 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 PRELID3AQ96N28 172 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 COL25A1Q9BXS0 654 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-209ENST00000477552 SMPXQ9UHP9 88 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 ZNF580Q9UK33 172 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 RAXQ9Y2V3 346 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 MOB4Q9Y3A3 225 aa6.54□□□□□ -1.36
PTPRD-209ENST00000477552 LOC400499M0QZD8 3231 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms