RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SGK494Q96LW2 274 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 RASL11BQ9BPW5 248 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 H3BRN7 92 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 IGHV3-48P01763 117 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 RBP4P02753 201 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 CT45A10P0DMU9 189 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 PSG1P11464 419 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 LOXP28300 417 aaPredicted RBP10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 LYZP61626 148 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 HSD52Q0P140 79 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 PSG3Q16557 428 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 HCP5Q6MZN7 132 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 PIFOQ8TCI5 191 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 VPS25Q9BRG1 176 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 NAV3Q8IVL0 2385 aa10.75□□□□□ -0.69
HLA-DMA-208ENST00000477541 C7orf71A4D174 169 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 TEX22C9J3V5 150 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 APOBEC3AP31941 199 aaPredicted RBP10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 CCL8P80075 99 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 PLGLAQ15195 96 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 PPP1R27Q86WC6 154 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 AP1S3Q96PC3 154 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 TPSG1Q9NRR2 321 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 PSG8Q9UQ74 426 aa10.74□□□□□ -0.69
HLA-DMA-208ENST00000477541 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 CBY3A6NI87 242 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 SHISA9B4DS77 424 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 I3L2K1 104 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 DIAPH2-AS1Q14236 149 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 RNF151Q2KHN1 245 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
HLA-DMA-208ENST00000477541 A0A087X0K7 114 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 FCN3O75636 299 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 FGF6P10767 208 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 UFSP1Q6NVU6 142 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 SIGLEC15Q6ZMC9 328 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 PIEZO2Q9H5I5 2752 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 PTPN13Q12923 2485 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 CADP27708 2225 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 GAGE10A6NGK3 116 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 Q6ZS92 163 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 FAM57AQ8TBR7 257 aa10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 ZNF48Q96MX3 618 aaPredicted RBP10.72□□□□□ -0.69
HLA-DMA-208ENST00000477541 TRAV8-1A0A0A6YYK1 113 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 SMAD7O15105 426 aaKnown RBP10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 IGLV1-47P01700 117 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 HBDP02042 147 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 CD24P25063 80 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
HLA-DMA-208ENST00000477541 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 COL6A6A6NMZ7 2263 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 IGHV1-3A0A0C4DH29 117 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 A1L4Q6 167 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 CSN3P07498 182 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 S100A7P31151 101 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 ZNF138P52744 262 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 DEFB109BQ30KR1 87 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 RUSC1-AS1Q66K80 236 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 EXOC3-AS1Q8N2X6 119 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 CTSZQ9UBR2 303 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 INSIG2Q9Y5U4 225 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 K7EP34 96 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 MRPS12O15235 138 aaKnown RBP10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 IGKV1-17P01599 117 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 WT1P19544 449 aaPredicted RBP10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 FAM27E3Q08E93 113 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 RITA1Q96K30 269 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 PRELID3AQ96N28 172 aa10.7□□□□□ -0.7
HLA-DMA-208ENST00000477541 PLCE1Q9P212 2302 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 A0A096LNJ9 63 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 LINC01546A6NGU7 62 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 LYPD2Q6UXB3 125 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 CSTL1Q9H114 145 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 SIGLEC8Q9NYZ4 499 aa10.69□□□□□ -0.7
HLA-DMA-208ENST00000477541 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
HLA-DMA-208ENST00000477541 H3BTX0 84 aa10.68□□□□□ -0.7
HLA-DMA-208ENST00000477541 RNF125Q96EQ8 232 aa10.68□□□□□ -0.7
HLA-DMA-208ENST00000477541 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
HLA-DMA-208ENST00000477541 RABAC1Q9UI14 185 aa10.68□□□□□ -0.7
HLA-DMA-208ENST00000477541 TEX15Q9BXT5 2789 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms