RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 IGHV3-21A0A0B4J1V1 117 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 PGPA6NDG6 321 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 PPP5D1E7EU14 171 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 TCRAP04437 139 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 SLC25A5P05141 298 aaKnown RBP5.18□□□□□ -1.58
LDB3-206ENST00000477489 S100A6P06703 90 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 UBE2G1P62253 170 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 CFHR3Q02985 330 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 KIAA0141Q14154 515 aaPredicted RBP5.18□□□□□ -1.58
LDB3-206ENST00000477489 USF2Q15853 346 aaPredicted RBP5.18□□□□□ -1.58
LDB3-206ENST00000477489 CT83Q5H943 113 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 SAMD13Q5VXD3 122 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 RASL11AQ6T310 242 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 Q6YL49 198 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 TMEM75Q8N9X5 138 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 NRGNQ92686 78 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 MRPL53Q96EL3 112 aaKnown RBP5.18□□□□□ -1.58
LDB3-206ENST00000477489 SLC50A1Q9BRV3 221 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 DERL1Q9BUN8 251 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 Q9H3A6 140 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 IL36BQ9NZH7 164 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 ZNF492Q9P255 531 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 VPREB3Q9UKI3 123 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 ZFP30Q9Y2G7 519 aa5.18□□□□□ -1.58
LDB3-206ENST00000477489 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.17□□□□□ -1.58
LDB3-206ENST00000477489 A0A1W2PS18 150 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 FAM231BA6NCW3 169 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 OR2T8A6NH00 312 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 H3BS24 57 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 NDUFA4O00483 81 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 LTAP01374 205 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 IGHG4P01861 327 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 MT-ND6P03923 174 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 CLEC3BP05452 202 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 GPR183P32249 361 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 BMI1P35226 326 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 RPS10P46783 165 aaKnown RBP5.17□□□□□ -1.58
LDB3-206ENST00000477489 CSN1S1P47710 185 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 KRTAP10-9P60411 292 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 ERVFC1-1P60608 527 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 RANP62826 216 aaKnown RBP5.17□□□□□ -1.58
LDB3-206ENST00000477489 TOMM20LQ6UXN7 152 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 SIGLEC15Q6ZMC9 328 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 TMEM219Q86XT9 240 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 BAGE2Q86Y30 109 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 ZNF414Q96IQ9 312 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 Q96MF0 132 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 CCDC140Q96MF4 163 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 METTL26Q96S19 204 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 PRSS22Q9GZN4 317 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 NPFFR1Q9GZQ6 430 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 ZNF586Q9NXT0 402 aa5.17□□□□□ -1.58
LDB3-206ENST00000477489 NIPBLQ6KC79 2804 aaeCLIP5.17□□□□□ -1.58
LDB3-206ENST00000477489 IGHV3OR16-10A0A075B7F0 116 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 TGIF2-C20orf24A0A0A6YYL0 155 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 RBAKDNA6NC62 111 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 G3V318 75 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 K7EN84 100 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 BUB3O43684 328 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 IGLV2-8P01709 118 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 TRGV3P03979 118 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 ELANEP08246 267 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 CXCL1P09341 107 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 TPPP2P59282 170 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 RPL15P61313 204 aaKnown RBP5.16□□□□□ -1.58
LDB3-206ENST00000477489 SLC35B1P78383 322 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 RPEL1Q2QD12 228 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 DEFB112Q30KQ8 113 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 IBA57Q5T440 356 aaKnown RBP5.16□□□□□ -1.58
LDB3-206ENST00000477489 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 WDR73Q6P4I2 378 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 COX8CQ7Z4L0 72 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 TMEM183AQ8IXX5 376 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 OR8I2Q8N0Y5 310 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 Q8N2B8 174 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 OR4B1Q8NGF8 309 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 SPATA3Q8NHX4 192 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 BLNKQ8WV28 456 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 GRAMD2BQ96HH9 432 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 MLST8Q9BVC4 326 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 GFRA4Q9GZZ7 299 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 SOX21Q9Y651 276 aaPredicted RBP5.16□□□□□ -1.58
LDB3-206ENST00000477489 URGCP-MRPS24S4R325 110 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 V9GYV3 84 aa5.16□□□□□ -1.58
LDB3-206ENST00000477489 ZNF469Q96JG9 3925 aaPredicted RBP5.16□□□□□ -1.58
LDB3-206ENST00000477489 A0A1W2PPQ1 181 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 C5orf52A6NGY3 159 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 K7EMT4 169 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 UBE2CO00762 179 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 S100A8P05109 93 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 PSMB8P28062 276 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 ARL3P36405 182 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 FOXE3Q13461 319 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 LY6EQ16553 131 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 C9orf152Q5JTZ5 239 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 SAPCD1Q5SSQ6 148 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 CLEC19AQ6UXS0 136 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 ATP5L2Q7Z4Y8 100 aa5.15□□□□□ -1.59
LDB3-206ENST00000477489 Q86TA4 180 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms