RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 RHOBP62745 196 aa6.61□□□□□ -1.35
COL4A5-204ENST00000477429 GPR107Q5VW38 600 aa6.61□□□□□ -1.35
COL4A5-204ENST00000477429 STEAP1BQ6NZ63 245 aa6.61□□□□□ -1.35
COL4A5-204ENST00000477429 ZBTB8BQ8NAP8 495 aaPredicted RBP6.61□□□□□ -1.35
COL4A5-204ENST00000477429 TMEM263Q8WUH6 116 aaKnown RBP6.61□□□□□ -1.35
COL4A5-204ENST00000477429 NAA50Q9GZZ1 169 aaKnown RBP6.61□□□□□ -1.35
COL4A5-204ENST00000477429 VCX3BQ9H321 246 aa6.61□□□□□ -1.35
COL4A5-204ENST00000477429 LINC00854A0A1B0GVQ3 168 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 FAM25AB3EWG3 89 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 FAM25CB3EWG5 89 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 FAM25GB3EWG6 89 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 MRPS12O15235 138 aaKnown RBP6.6□□□□□ -1.35
COL4A5-204ENST00000477429 SIVA1O15304 175 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 PITX3O75364 302 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 B3GALNT1O75752 331 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 ERVFC1-1P60608 527 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 SMCO1Q147U7 214 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 GFI1BQ5VTD9 330 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 Q6ZSN1 163 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 TMED4Q7Z7H5 227 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 OR4D5Q8NGN0 318 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 OR1B1Q8NGR6 318 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 MIXL1Q9H2W2 232 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 EXTL2Q9UBQ6 330 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 C14orf166Q9Y224 244 aaKnown RBP6.6□□□□□ -1.35
COL4A5-204ENST00000477429 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
COL4A5-204ENST00000477429 H3BNG1 76 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 H3BTX0 84 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 J3KRW8 73 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 TNFAIP8O95379 198 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 ZNF182P17025 639 aaPredicted RBP6.59□□□□□ -1.35
COL4A5-204ENST00000477429 TBPP20226 339 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 GCSHP23434 173 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 CCR6P51684 374 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 PSG3Q16557 428 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 PATE2Q6UY27 113 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 NOXA1Q86UR1 476 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 TMEM256Q8N2U0 113 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
COL4A5-204ENST00000477429 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
COL4A5-204ENST00000477429 GABARAPH6UMI1 98 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 SLC17A3O00476 420 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 GABARAPO95166 117 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 CDKN1BP46527 198 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 TAS2R19P59542 299 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 ZNF493Q6ZR52 646 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 OR51S1Q8NGJ8 323 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 RPUSD4Q96CM3 377 aaKnown RBP6.58□□□□□ -1.36
COL4A5-204ENST00000477429 FUNDC2Q9BWH2 189 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 PAIP2BQ9ULR5 123 aaKnown RBP6.58□□□□□ -1.36
COL4A5-204ENST00000477429 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
COL4A5-204ENST00000477429 A0A0B4J2A0 478 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 H7BYZ3 331 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 CCNKO75909 580 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 ATP6V1G2O95670 118 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 RLN2P04090 185 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 SURF2Q15527 256 aaPredicted RBP6.57□□□□□ -1.36
COL4A5-204ENST00000477429 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 MORN5Q5VZ52 161 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 GGNBP1Q5YKI7 109 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 Q6ZQT7 251 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 OR1S1Q8NH92 325 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 TMEM147Q9BVK8 224 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 SHPKQ9UHJ6 478 aa6.57□□□□□ -1.36
COL4A5-204ENST00000477429 A0A087X0K7 114 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 H3BP45 60 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 IFNA5P01569 189 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 IGHV3-53P01767 116 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 FABP1P07148 127 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 CT45A10P0DMU9 189 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 AKR1C4P17516 323 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 DAZ2Q13117 558 aaKnown RBP6.56□□□□□ -1.36
COL4A5-204ENST00000477429 ACOT7LQ6ZUV0 252 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 BPIFCQ8NFQ6 507 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 GPR82Q96P67 336 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 GSN-AS1Q9NRJ2 163 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 PPP1R14DQ9NXH3 145 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 PTTG2Q9NZH5 202 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 KLF12Q9Y4X4 402 aa6.56□□□□□ -1.36
COL4A5-204ENST00000477429 PMS2P5A8MQ11 134 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 WRBO00258 174 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 CTDSP2O14595 271 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
COL4A5-204ENST00000477429 CTF1Q16619 201 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 TEPPQ6URK8 271 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 CYP2G1PQ6ZSU1 146 aa6.55□□□□□ -1.36
COL4A5-204ENST00000477429 ZNF431Q8TF32 576 aaPredicted RBP6.55□□□□□ -1.36
COL4A5-204ENST00000477429 ZNF331Q9NQX6 463 aaPredicted RBP6.55□□□□□ -1.36
COL4A5-204ENST00000477429 DISC1C4P0D8 188 aa6.54□□□□□ -1.36
COL4A5-204ENST00000477429 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
COL4A5-204ENST00000477429 H2AFB2P0C5Z0 115 aa6.54□□□□□ -1.36
COL4A5-204ENST00000477429 LINC00869P0C866 280 aa6.54□□□□□ -1.36
COL4A5-204ENST00000477429 ATP5IP56385 69 aaPredicted RBP6.54□□□□□ -1.36
COL4A5-204ENST00000477429 CCDC190Q86UF4 302 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms