RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 A0A087WXM4 84 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 DISC1C4P0D8 188 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 NXPH4O95158 308 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 AKR1C4P17516 323 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 RPL7P18124 248 aaKnown RBP11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 GCSHP23434 173 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 TMED4Q7Z7H5 227 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 RPUSD4Q96CM3 377 aaKnown RBP11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 C20orf144Q9BQM9 153 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 SHANK2-AS3Q9BTD1 123 aa11.2□□□□□ -0.62
APOBEC3F-203ENST00000476513 SNURFLB1AK76 121 aa11.19□□□□□ -0.62
APOBEC3F-203ENST00000476513 PRSS46E5RG02 174 aa11.19□□□□□ -0.62
APOBEC3F-203ENST00000476513 Q6ZTI0 123 aa11.19□□□□□ -0.62
APOBEC3F-203ENST00000476513 PARD6GQ9BYG4 376 aaPredicted RBP11.19□□□□□ -0.62
APOBEC3F-203ENST00000476513 A0A087X0K7 114 aa11.18□□□□□ -0.62
APOBEC3F-203ENST00000476513 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
APOBEC3F-203ENST00000476513 LRRC20Q8TCA0 184 aa11.18□□□□□ -0.62
APOBEC3F-203ENST00000476513 C15orf40Q8WUR7 153 aa11.18□□□□□ -0.62
APOBEC3F-203ENST00000476513 PITX3O75364 302 aa11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 SSBP1Q04837 148 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 CNPY1Q3B7I2 92 aa11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 OR51S1Q8NGJ8 323 aa11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 RBM38Q9H0Z9 239 aaKnown RBP11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 HIGD1AQ9Y241 93 aa11.17□□□□□ -0.62
APOBEC3F-203ENST00000476513 RAP2BP61225 183 aa11.16□□□□□ -0.62
APOBEC3F-203ENST00000476513 AKR1C1Q04828 323 aa11.16□□□□□ -0.62
APOBEC3F-203ENST00000476513 PRRT1Q99946 306 aa11.16□□□□□ -0.62
APOBEC3F-203ENST00000476513 FUNDC2Q9BWH2 189 aa11.16□□□□□ -0.62
APOBEC3F-203ENST00000476513 TRGV2A0A075B6R0 118 aa11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 KRTAP29-1A8MX34 341 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 AKAIN1P0CW23 69 aa11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 CYP2G1PQ6ZSU1 146 aa11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 AP3S1Q92572 193 aa11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 VCX3AQ9NNX9 186 aa11.15□□□□□ -0.62
APOBEC3F-203ENST00000476513 HYPMO75409 117 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 IL5P05113 134 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 SRPXP78539 464 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 MRPS10P82664 201 aaKnown RBP11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 ACOT7LQ6ZUV0 252 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 CLVS1Q8IUQ0 354 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 HMCN2Q8NDA2 5059 aa11.14□□□□□ -0.63
APOBEC3F-203ENST00000476513 PRAC2D3DTV9 90 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 J3KRW8 73 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 OR5G3P0C626 314 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 PLP1P60201 277 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 SMIM4Q8WVI0 70 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 CIB3Q96Q77 187 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 MIXL1Q9H2W2 232 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 ZNF331Q9NQX6 463 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 MSRB1Q9NZV6 116 aa11.13□□□□□ -0.63
APOBEC3F-203ENST00000476513 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 TRAV12-3A0A0B4J271 114 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 PMS2P5A8MQ11 134 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 WRBO00258 174 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 PAX4O43316 350 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 MED6O75586 246 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 LINC00869P0C866 280 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 ANXA3P12429 323 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 FUT9Q9Y231 359 aa11.12□□□□□ -0.63
APOBEC3F-203ENST00000476513 SYNGR2O43760 224 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 SLC25A6P12236 298 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 CXCL2P19875 107 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 SPANXN5Q5MJ07 72 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 LYPD5Q6UWN5 251 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 PYGO2Q9BRQ0 406 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 SCP2D1Q9UJQ7 156 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
APOBEC3F-203ENST00000476513 IGLV5-52A0A0A0MRZ9 124 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 TRGV1A0A0A0MS02 117 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 LINC00854A0A1B0GVQ3 168 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 NPIPB6E9PJ23 425 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 H3BP45 60 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 LCN15Q6UWW0 184 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 C11orf72Q8NBR9 251 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 ZNF431Q8TF32 576 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 SLC50A1Q9BRV3 221 aa11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 RSL24D1Q9UHA3 163 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-203ENST00000476513 CT45A10P0DMU9 189 aa11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 LEPP41159 167 aa11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 SELENOTP62341 195 aa11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 S100A7AQ86SG5 101 aa11.09□□□□□ -0.63
APOBEC3F-203ENST00000476513 ZBTB8BQ8NAP8 495 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms