RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 GLI3P10071 1580 aa2.1□□□□□ -2.07
TM9SF3-204ENST00000475401 FAM135BQ49AJ0 1406 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 TSPAN19P0C672 248 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 ZNF705BP0CI00 300 aaPredicted RBP2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 ZNF93P35789 620 aaPredicted RBP2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 DEFB103AP81534 67 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 KLRD1Q13241 179 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 TMEM244Q5VVB8 128 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 OR5A2Q8NGI9 324 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 TSC22D3Q99576 134 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 OR5AC2Q9NZP5 309 aa2.09□□□□□ -2.07
TM9SF3-204ENST00000475401 MYO9BQ13459 2157 aa2.09□□□□□ -2.08
TM9SF3-204ENST00000475401 RFX7Q2KHR2 1363 aa2.09□□□□□ -2.08
TM9SF3-204ENST00000475401 COL4A5P29400 1685 aa2.09□□□□□ -2.08
TM9SF3-204ENST00000475401 ERCC6Q03468 1493 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 DISP1Q96F81 1524 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 B4DSR2 109 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 MT-ND4LP03901 98 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 FOXA3P55318 350 aaPredicted RBP2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 RPL26P61254 145 aaKnown RBP2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 QRFPP83859 136 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 ZNF846Q147U1 533 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 TMEM155Q4W5P6 130 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 GLYATL3Q5SZD4 288 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 C4orf22Q6V702 233 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 TEX29Q8N6K0 151 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 FAM216BQ8N7L0 139 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 OR4S1Q8NGB4 309 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 RETNLBQ9BQ08 111 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 C14orf132Q9NPU4 83 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 RPL26L1Q9UNX3 145 aaKnown RBP2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 OVOS2A0A0J9YW53 1432 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 RTEL1-TNFRSF6BF6WH68 1400 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 OVOS2Q6IE36 1432 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 KIAA1107Q9UPP5 1409 aa2.08□□□□□ -2.08
TM9SF3-204ENST00000475401 MYO5AQ9Y4I1 1855 aaKnown RBP2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 TRAV3A0A0B4J244 114 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 ZNF727A8MUV8 499 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 PAEPP09466 180 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 MGST1P10620 155 aaKnown RBP2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 CRYGSP22914 178 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 KDELR1P24390 212 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 Q8N814 137 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 OR4K15Q8NH41 348 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 OR4C6Q8NH72 309 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 CHCHD1Q96BP2 118 aaKnown RBP2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 PRELID3AQ96N28 172 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 NIT2Q9NQR4 276 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 DSPPQ9NZW4 1301 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 ANAPC1Q9H1A4 1944 aa2.07□□□□□ -2.08
TM9SF3-204ENST00000475401 COL5A3P25940 1745 aaPredicted RBP2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 A0A087WSZ3 146 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 TRAV1-1A0A0B4J248 108 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 C5orf58C9J3I9 102 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 ZNF737O75373 536 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 SULT1C4O75897 302 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 UBL3O95164 117 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 DNAJB13P59910 316 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 MRPS36P82909 103 aaKnown RBP2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 OR5H6Q8NGV6 325 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 POP5Q969H6 163 aaKnown RBP2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 LY96Q9Y6Y9 160 aa2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 PRG4Q92954 1404 aaPredicted RBP2.06□□□□□ -2.08
TM9SF3-204ENST00000475401 UQCRQO14949 82 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 ASAH2BP0C7U1 165 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 SSR2P43308 183 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 RAB5CP51148 216 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 PDE6HQ13956 83 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 CDK5R1Q15078 307 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 Q1T7F1 81 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 LINC00301Q8NCQ3 95 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 OR4B1Q8NGF8 309 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 C1orf54Q8WWF1 131 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 PSMF1Q92530 271 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 HYLS1Q96M11 299 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 ERG28Q9UKR5 140 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 CCDC171Q6TFL3 1326 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 DLC1Q96QB1 1528 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 NCKAP5O14513 1909 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 NUMA1Q14980 2115 aa2.05□□□□□ -2.08
TM9SF3-204ENST00000475401 MEIKINA0A087WXM9 373 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 IGKV2D-26A0A0A0MRZ7 120 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 TRAV12-1A0A0B4J245 112 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 DISP2A7MBM2 1401 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 E7EUB6 86 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 PROSCO94903 275 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 MT-ND6P03923 174 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 TCRAP04437 139 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 SLC25A5P05141 298 aaKnown RBP2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 IGLC6P0CF74 106 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 CCL4P13236 92 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 PLXNA3P51805 1871 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 DSCR4P56555 118 aaPredicted RBP2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 MAXP61244 160 aa2.04□□□□□ -2.08
TM9SF3-204ENST00000475401 RNASE10Q5GAN6 216 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms