RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 KMT2EQ8IZD2 1858 aa4.71□□□□□ -1.65
ECHDC1-215ENST00000475319 CPAMD8Q8IZJ3 1885 aa4.71□□□□□ -1.65
ECHDC1-215ENST00000475319 LCTP09848 1927 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 K7EM74 188 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 K7EQS6 105 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 IGKV1D-33P01593 117 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 IGKV1-33P01594 117 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 PSMB2P49721 201 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 POLR2LP62875 67 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 CST6Q15828 149 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 SP6Q3SY56 376 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 TMEM170BQ5T4T1 132 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 ASPHD1Q5U4P2 390 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 PLPP4Q5VZY2 271 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 C11orf53Q8IXP5 236 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 FAM19A4Q96LR4 140 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 FAM60AQ9NP50 221 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 SERP1Q9Y6X1 66 aa4.71□□□□□ -1.66
ECHDC1-215ENST00000475319 NLRC5Q86WI3 1866 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 NUP205Q92621 2012 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 DOCK6Q96HP0 2047 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 C5orf63A6NC05 138 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 LYPD3O95274 346 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 C1orf105O95561 183 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 OXTP01178 125 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 FRMD6-AS1P0C7T7 363 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 CXCL8P10145 99 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 UBE2L3P68036 154 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 RSPO1Q2MKA7 263 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 ZC2HC1BQ5TFG8 222 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 C22orf39Q6P5X5 142 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC00173Q6ZV60 143 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 RPRMLQ8N4K4 120 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 KLK6Q92876 244 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF503Q96F45 646 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 UNC80Q8N2C7 3258 aa4.7□□□□□ -1.66
ECHDC1-215ENST00000475319 TRBV25-1A0A075B6N4 114 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 SMIM26A0A096LP01 95 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 TRAV17A0A0B4J275 112 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 TRBV5-4A0A0C4DH59 114 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 LGALS9O00182 355 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC01565O15544 149 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 SLC25A20O43772 301 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 SRSF10O75494 262 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 PTPRZ1P23471 2315 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 COL8A2P25067 703 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 FKBP2P26885 142 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 NPC2P61916 151 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 MYO7AQ13402 2215 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 CDSNQ15517 529 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 PIK3CD-AS1Q5SR53 167 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC00311Q8N616 119 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 DRAM1Q8N682 238 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 RFESDQ8TAC1 157 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 ARHGAP5-AS1Q96IT6 56 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 PRRG4Q9BZD6 226 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 PSENENQ9NZ42 101 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 F11RQ9Y624 299 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 R4GMQ9 66 aa4.69□□□□□ -1.66
ECHDC1-215ENST00000475319 IGHV3OR15-7A0A075B7D8 119 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 A0A0A6YYD4 124 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 TRAV26-2A0A0B4J265 109 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 A0A1B0GTH9 108 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 UBE2L5PA0A1B0GUS4 154 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 A0A1B0GXF2 115 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 LILRA5A6NI73 299 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 IGLV3-25P01717 112 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 MFAP2P55001 183 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 HILS1P60008 231 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 HBBP68871 147 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 CFHR1Q03591 330 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 FAM201AQ5SY85 155 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 Q8N1X5 172 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 PRSS33Q8NF86 280 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 BORCS8Q96FH0 119 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 ZNF414Q96IQ9 312 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 C2orf48Q96LS8 159 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 TRGV9Q99603 122 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 C19orf25Q9UFG5 118 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC00527Q9UJ94 153 aa4.68□□□□□ -1.66
ECHDC1-215ENST00000475319 PTPRSQ13332 1948 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 H3BMM0 161 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 C16orf97H3BN30 126 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 SYNGR2O43760 224 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 SPINK4O60575 86 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 LYZL6O75951 148 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 PIRTP0C851 137 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 GP9P14770 177 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 CTLA4P16410 223 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 CCL8P80075 99 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 MRPS36P82909 103 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 FHL1Q13642 323 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 LINC00643Q86TS7 51 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 MARCH3Q86UD3 253 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 UBE2WQ96B02 151 aa4.67□□□□□ -1.66
ECHDC1-215ENST00000475319 DSCR8Q96T75 97 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms