RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 IFNA7P01567 189 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 OR10J4P0C629 311 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 NBEAP1P0C6P0 100 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-206ENST00000474648 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
COL8A1-206ENST00000474648 CCL20P78556 96 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 KHDC3LQ587J8 217 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 PQLC2Q6ZP29 291 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
COL8A1-206ENST00000474648 GBGT1Q8N5D6 347 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 DCANP1Q8TF63 244 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 SAT2Q96F10 170 aaPredicted RBP7.5□□□□□ -1.21
COL8A1-206ENST00000474648 MAP1LC3BQ9GZQ8 125 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 MS4A6AQ9H2W1 248 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 HRH4Q9H3N8 390 aa7.5□□□□□ -1.21
COL8A1-206ENST00000474648 IGKV3-7A0A075B6H7 116 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 TRBV19A0A075B6N1 114 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 TRAV8-2A0A0B4J237 113 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 K7EQG2 157 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 OR7C2O60412 319 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 GCHFRP30047 84 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 BLOC1S1P78537 153 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 BEAN1Q3B7T3 259 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 WFDC3Q8IUB2 231 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 LYPD6BQ8NI32 183 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 NRN1Q9NPD7 142 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 UBQLN2Q9UHD9 624 aa7.49□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF256Q9Y2P7 627 aaPredicted RBP7.49□□□□□ -1.21
COL8A1-206ENST00000474648 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 G3V4G9 280 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 SLC17A3O00476 420 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 NMBP08949 121 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 ATF4P18848 351 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-206ENST00000474648 TFPI2P48307 235 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 KRTAP10-11P60412 298 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 UBE2L3P68036 154 aaKnown RBP7.48□□□□□ -1.21
COL8A1-206ENST00000474648 GUK1Q16774 197 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 IGFL4Q6B9Z1 124 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 LRRC20Q8TCA0 184 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 PCNPQ8WW12 178 aaKnown RBP7.48□□□□□ -1.21
COL8A1-206ENST00000474648 SPAG8Q99932 426 aaPredicted RBP7.48□□□□□ -1.21
COL8A1-206ENST00000474648 GPR61Q9BZJ8 451 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
COL8A1-206ENST00000474648 A0A1B0GV50 99 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
COL8A1-206ENST00000474648 HLA-DMBP28068 263 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 MEOX2P50222 304 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 PAFAH1B2P68402 229 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 GUCA2BQ16661 112 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 LCN12Q6JVE5 192 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF767PQ75MW2 155 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 BLNKQ8WV28 456 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 ZNF331Q9NQX6 463 aaPredicted RBP7.47□□□□□ -1.21
COL8A1-206ENST00000474648 TMEM167BQ9NRX6 74 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
COL8A1-206ENST00000474648 ISLRO14498 428 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 RGS13O14921 159 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF253O75346 499 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 HBE1P02100 147 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 RANP62826 216 aaKnown RBP7.46□□□□□ -1.22
COL8A1-206ENST00000474648 PMS2P11Q13670 270 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 PDE6HQ13956 83 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 C16orf92Q96LL3 132 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
COL8A1-206ENST00000474648 YTHDF2Q9Y5A9 579 aaKnown RBP7.46□□□□□ -1.22
COL8A1-206ENST00000474648 OR4C46A6NHA9 309 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 CD7P09564 240 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 PSMB3P49720 205 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 PSG9Q00887 426 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 KPRPQ5T749 579 aaPredicted RBP7.45□□□□□ -1.22
COL8A1-206ENST00000474648 IQCF2Q8IXL9 164 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 Q8N1Y9 231 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 LYPD1Q8N2G4 141 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 EXOC3-AS1Q8N2X6 119 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 RNF182Q8N6D2 247 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 Q9H3A6 140 aa7.45□□□□□ -1.22
COL8A1-206ENST00000474648 SORL1Q92673 2214 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 A0A1W2PRE2 83 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 PGPA6NDG6 321 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 FAM74A7A6NL05 159 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF705FA8MVS1 300 aaPredicted RBP7.44□□□□□ -1.22
COL8A1-206ENST00000474648 EREGO14944 169 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 PAGE4O60829 102 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 ZNF688P0C7X2 276 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 ID1P41134 155 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 DEFB1P60022 68 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 UBE2G2P60604 165 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 ICAM4Q14773 271 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 PSG3Q16557 428 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 ODF3L2Q3SX64 289 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 CLLU1Q5K131 121 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
COL8A1-206ENST00000474648 CCDC28AQ8IWP9 274 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms