RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SGK494Q96LW2 274 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 AAMDCQ9H7C9 122 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 HIF1ANQ9NWT6 349 aa7.6□□□□□ -1.19
USP39-214ENST00000474572 H3BUX3 64 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 BUB3O43684 328 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 AVPP01185 164 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 CRISP2P16562 243 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 FOXA3P55318 350 aaPredicted RBP7.59□□□□□ -1.19
USP39-214ENST00000474572 LOXL1Q08397 574 aaPredicted RBP7.59□□□□□ -1.19
USP39-214ENST00000474572 OR10J3Q5JRS4 329 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 C1orf194Q5T5A4 169 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
USP39-214ENST00000474572 LRRC75A-AS1Q8N1F1 130 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 CIARTQ8N365 385 aaPredicted RBP7.59□□□□□ -1.19
USP39-214ENST00000474572 LINC01356Q8N9X3 169 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 NRGNQ92686 78 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
USP39-214ENST00000474572 GSN-AS1Q9NRJ2 163 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 IGSF10Q6WRI0 2623 aa7.59□□□□□ -1.19
USP39-214ENST00000474572 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 HIGD1CA8MV81 97 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 M0R3E3 92 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 NUPR1O60356 82 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 FSHBP01225 129 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 P01737 135 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 IGHG4P01861 327 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 CLEC3BP05452 202 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 SLC35B1P78383 322 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 RELQ04864 619 aaPredicted RBP7.58□□□□□ -1.2
USP39-214ENST00000474572 ATP5G2Q06055 141 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 GDF5OSQ5U4N7 250 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 CLEC19AQ6UXS0 136 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 Q71RC1 249 aaPredicted RBP7.58□□□□□ -1.2
USP39-214ENST00000474572 PRNTQ86SH4 94 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 ZC2HC1AQ96GY0 325 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 WNK2Q9Y3S1 2297 aa7.58□□□□□ -1.2
USP39-214ENST00000474572 A0A1B0GUS0 222 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 SPINK4O60575 86 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 APOHP02749 345 aaPredicted RBP7.57□□□□□ -1.2
USP39-214ENST00000474572 CSN1S1P47710 185 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 CRIP1P50238 77 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 PAFAH1B2P68402 229 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 CFHR3Q02985 330 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 MRPL53Q96EL3 112 aaKnown RBP7.57□□□□□ -1.2
USP39-214ENST00000474572 DAZAP1Q96EP5 407 aaKnown RBP7.57□□□□□ -1.2
USP39-214ENST00000474572 USMG5Q96IX5 58 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 SLC50A1Q9BRV3 221 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 PRDM13Q9H4Q3 707 aa7.57□□□□□ -1.2
USP39-214ENST00000474572 BEX4Q9NWD9 120 aaPredicted RBP7.57□□□□□ -1.2
USP39-214ENST00000474572 USP24Q9UPU5 2620 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 CFAP46Q8IYW2 2715 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 CHEK1O14757 476 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 IGLV1-40P01703 118 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 APCSP02743 223 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 GZMBP10144 247 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 COL8A1P27658 744 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 HBBP68871 147 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 SLAQ13239 276 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 KLF5Q13887 457 aaPredicted RBP7.56□□□□□ -1.2
USP39-214ENST00000474572 LY6EQ16553 131 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 RBPMS2Q6ZRY4 209 aaKnown RBP7.56□□□□□ -1.2
USP39-214ENST00000474572 C9orf139Q6ZV77 190 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 TCF24Q7RTU0 167 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 NOL4LQ96MY1 436 aaPredicted RBP7.56□□□□□ -1.2
USP39-214ENST00000474572 MS4A10Q96PG2 267 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 GNB4Q9HAV0 340 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 CR1P17927 2039 aa7.56□□□□□ -1.2
USP39-214ENST00000474572 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.55□□□□□ -1.2
USP39-214ENST00000474572 RBAKDNA6NC62 111 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 F2Z2F3 143 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 HAX1O00165 279 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 NDUFA4O00483 81 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 SERF1AO75920 110 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 TRGV3P03979 118 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 SRIP30626 198 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 RAB4BP61018 213 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
USP39-214ENST00000474572 SAPCD1Q5SSQ6 148 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 GLMPQ8WWB7 406 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 METTL26Q96S19 204 aa7.55□□□□□ -1.2
USP39-214ENST00000474572 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
USP39-214ENST00000474572 A1L4Q6 167 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 A8MWP6 167 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
USP39-214ENST00000474572 IGHV4-31P0DP07 118 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 ARL3P36405 182 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 TPPP2P59282 170 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 DEFB113Q30KQ7 82 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 KIAA1644Q3SXP7 199 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 Q6AWC8 147 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
USP39-214ENST00000474572 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms