RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CCDC94Q9BW85 323 aaPredicted RBP0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 SSR3Q9UNL2 185 aa0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 SYNE2Q8WXH0 6885 aaKnown RBP0.35□□□□□ -2.35
ECHDC1-213ENST00000474240 ASCC3Q8N3C0 2202 aaKnown RBP0.34□□□□□ -2.35
ECHDC1-213ENST00000474240 SCN8AQ9UQD0 1980 aa0.34□□□□□ -2.35
ECHDC1-213ENST00000474240 HEATR1Q9H583 2144 aaKnown RBP0.34□□□□□ -2.35
ECHDC1-213ENST00000474240 TRAV5A0A0B4J249 113 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 RIIAD1A6NNX1 92 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 ZNF727A8MUV8 499 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 H7C1C5 153 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 K7EIL1 84 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 RER1O15258 196 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 HIST1H2BKO60814 126 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 HIST1H2BJP06899 126 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 CCL4P13236 92 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 PPP1R2P41236 205 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 LCN6P62502 163 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 FADDQ13158 208 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 AKR1C8PQ5T2L2 129 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 Q86TA4 180 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 C5orf17Q8NAS9 161 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 ZC2HC1AQ96GY0 325 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 ERBINQ96RT1 1412 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 SMR3AQ99954 134 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 ARMC1Q9NVT9 282 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 NUP98P52948 1817 aa0.34□□□□□ -2.36
ECHDC1-213ENST00000474240 CHD3Q12873 2000 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 MYO18AQ92614 2054 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 IFNA6P05013 189 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 OGNP20774 298 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 TMBIM6P55061 237 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 GRPEL2Q8TAA5 225 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 MALSU1Q96EH3 234 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 PRAP1Q96NZ9 151 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 MACF1Q9UPN3 7388 aaKnown RBP0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 CEP164Q9UPV0 1460 aa0.33□□□□□ -2.36
ECHDC1-213ENST00000474240 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 ZFYVE9O95405 1425 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 A0A0D9SG42 100 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PRORSD1PA6NEY8 169 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PHGR1C9JFL3 82 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PRH1P02810 166 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 S100A6P06703 90 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 CRHP06850 196 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PHBP35232 272 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 VMA21Q3ZAQ7 101 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 OCIAD2Q56VL3 154 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PXT1Q8NFP0 134 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 CHMP6Q96FZ7 201 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 LYRM2Q9NU23 88 aaPredicted RBP0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PIK3C2AO00443 1686 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 PLXNA4Q9HCM2 1894 aa0.32□□□□□ -2.36
ECHDC1-213ENST00000474240 MGAMO43451 1857 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 PTPRFP10586 1907 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 E2F6O75461 281 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 TRGC2P03986 189 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 CD14P08571 375 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 CTXN2P0C2S0 81 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 ARPP19P56211 112 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 EIF3IQ13347 325 aaKnown RBP0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 GLIPR1L1Q6UWM5 242 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 TMEM14EPQ6UXP3 125 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 OR13C6PQ8NH95 151 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 CST11Q9H112 138 aa0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 PCF11O94913 1555 aaKnown RBP0.31□□□□□ -2.36
ECHDC1-213ENST00000474240 BCORL1Q5H9F3 1711 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 C9orf170A2RU37 121 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 TMEM210A6NLX4 147 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 CST7O76096 145 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 RPL35P42766 123 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 RPL37AP61513 92 aaKnown RBP0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 PATE2Q6UY27 113 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 C10orf111Q8N326 155 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 FAM216BQ8N7L0 139 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 MCEEQ96PE7 176 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 EFCAB11Q9BUY7 163 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 LAMTOR3Q9UHA4 124 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 TPRKBQ9Y3C4 175 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 KMT2DO14686 5537 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 RFX7Q2KHR2 1363 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 CITO14578 2027 aa0.3□□□□□ -2.36
ECHDC1-213ENST00000474240 CAMSAP1Q5T5Y3 1602 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 TRPM1Q7Z4N2 1603 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 C5orf58C9J3I9 102 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 SULT1C4O75897 302 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 MT-ND6P03923 174 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 CXCL1P09341 107 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 IDO1P14902 403 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 HSD11B1P28845 292 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 FXYD4P59646 89 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 ERVS71-1P61550 626 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 GNG5P63218 68 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 DIAPH2-AS1Q14236 149 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 SNCBQ16143 134 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 SPINK6Q6UWN8 80 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 DGCR14Q96DF8 476 aaKnown RBP0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 SH3BGRL3Q9H299 93 aa0.29□□□□□ -2.36
ECHDC1-213ENST00000474240 STOML2Q9UJZ1 356 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms